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FASTA Sequence PDB Format mmCIF Format
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9KHT

Cryo-em structure of ufd2/ubc4-ub in complex with k29-linked triub (dimeric conformation)

PDB DOI: 10.2210/pdb9kht/pdb

Classification: LIGASE
Organism(s): Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C)

Deposited: 2024-11-11
Deposition Author(s): Ai, H.S. , Liu, L. , Tong, Z.B.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.85 Å

9kht
Literature

Cryo-em structure of ufd2/ubc4-ub in complex with k29-linked triub (dimeric conformation)

Ai, H.S. , Liu, L. , Tong, Z.B.

Primary Citation of Related Structures: 9KHT


Proteins
Molecule Chains Sequence Length Organism Sequence
Polyubiquitin-C D 76 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGCQLEDGRTLSDYNIQKESTLHLVLRLRGG
Ubiquitin E 76 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Ubiquitin F 76 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Ubiquitin C 76 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
E4 ubiquitin-protein ligase UFD2 A 955 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MTAIEDILQITTDPSDTRGYSLLKSEEVPQGSTLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHSTFQEIDRLVIGYGVVALQIENFCMNGAFINYITGIVSNVNSYTDFLSQIIQRAILEGTALDLLNAVFPTLLEYCNKHVSHFDLNESVIYNNVLTIFELFVTFKPIAEIFTKIDGFFADYSCKPQDFERKTILGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIGVENVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPPTREEEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQKKEEA
Ubiquitin-conjugating enzyme E2 4 B 148 Homo Sapiens , Saccharomyces Cerevisiae (Strain Atcc 204508 / S288C) MSSSKRIAKELSDLERDPPTSSSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSISSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYAV
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-11-11
Deposition Author(s): Ai, H.S. , Liu, L. , Tong, Z.B.