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FASTA Sequence PDB Format mmCIF Format
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9K9S

Mpxv dna polymerase in complex with primer/4u template dna

PDB DOI: 10.2210/pdb9k9s/pdb

Classification: REPLICATION/DNA
Organism(s): Penicillium Aethiopicum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2024-10-27
Deposition Author(s): Ding, Q. , Gao, F. , Kuai, L. , Li, X.M. , Peng, Q. , Qi, J.X. , Shi, Y. , Wang, H. , Wang, Q. , Xie, Y.F.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.39 Å

9k9s
Literature

Mpxv dna polymerase in complex with primer/4u template dna

Ding, Q. , Gao, F. , Kuai, L. , Li, X.M. , Peng, Q. , Qi, J.X. , Shi, Y. , Wang, H. , Wang, Q. , Xie, Y.F.

Primary Citation of Related Structures: 9K9S


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase A 1031 Penicillium Aethiopicum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MWSHPQFEKGSGSWSHPQFEKGSGSMDVRCINWFESHGENRFLYLKSRCRNGETVFIRFPHYFYYVVTDEIYQSLSPPPFNARPMGKMRTIDIDETISYNLDIKDRKCSVADMWLIEEPKKRSIQNATMDEFFNISWFYISNGISPDGCYSLDEQYLTKINNGCYHCDDPRNCFAKEIPRFDIPRSYLFLAIACHFDKKFPSVFINPISHTSYCYIDLSGKRLLFTLINEEMLTEQEIQEAVDRGCLRIQSLMEMDYERELVLCSEIVLLRIAKQLLELTFDYVVTFNGHNFDLRYITNRLELLTGEKIIFRSPDKKEAVHLCIYERNQSSHKGVCGMANTTFHVNNNNGTIFFDLYSFIQKSEKLDSYKLDSISKNAFSCMGKVLNRGVREMTFIGDDTTDAKGKADTFAKVLTTGNYVTVDEDIICKVIRKDILENGFKVVLSCPTLPNDIYKLSFGKDDIDLAQMYKDYNLNIALDMARYCIHDACLCQYLWEYYGVETKTDAGAATYVLPQSMVFEYRASTIIKGPLLKLLLETKTILVRSETKQKFPYEGGKVFAPKQKMFSNNVLIFDYNSLYPNVCIFGNLSPETLVGVVVSTNRLEEEINNQLLLQKYPPPRYITVHCEPRLPNLISEIAIFDRSIEGTIPRLLRTFLAERARYKKMLKQATSSTEKAIYDSMQYTYKIVANSVYGLMGFRNSALYSYASAKSCTSIGRRMILYLESVLNGAELSNGMLRFANTLSNPFYMDDRDINPIVKTSLPIDYRFRFRSVYGDTDSVFTEIDSQDVDKSIEIAKELERLINSRVLFNNFKIEFEAVYKNLIMQSKKKYTTMKYSASSNSKSVPERINKGTSETRRDVSKFHKNMIKTYKTRLSEMLSEGRMNSNQVCIDILRSLETDLRSEFDSRSSPLELFMLSRMHHSNYKSADNPNMYLVTEYNKNNPETIELGERYYFAYICPANVPWTKKLVNIKTYETIIDRSFKLGSNQRIFYEVYFKRLTSEIVNLLDNKVLCISFFQRMFGSRPTFYEA
E4R B 218 Penicillium Aethiopicum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MNSVTISHAPYTITYHDDWEPVMSQLVEFYNEVASWLLRDETSPIPDKFFIQLKQPLRNKRVCVCGIDPYPKDGTGVPFESPNFTKKSIKEIASSISRLTGVIDYKGYNLNIIDGVIPWNYYLSCKLGETKSHAIYWDKISKLLLQHITKHVSVLYCLGKTDFSNIRAKLESPVTTIVGYHPAARDHQFEKDRSFEIINVLLELDNKTPINWAQGFIY
DNA polymerase processivity factor component A20 C 426 Penicillium Aethiopicum , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MTSSADLTNLKELLSLYKSLRFSDSVAIEKYNSLVEWGTSTYWKIGVQKVTNVETSISDYYDEVKNKPFNIDPGYYIFLPVYFGSVFIYSKGKNMVELGSGNSFQIPDEIRSACNKVLDSDNGIDFLRFVLLNNRWIMEDAISKYQSPVNIFKLASEYGLNIPNYLEIEIEEDTLFDDELYSIMERSFDDTFPKISISYIKLGELKRQVVDFFKFSFMYIESIKVDRIGDNIFIPSVITKSGKKILVKDVDHLIRSKVREHTFVKVKKKNTFSILYDYDGNGTETRGEVIKRIIDTIGRDYYVNGKYFSKVGIAGLKQLTNKLDINECATVDELVDEINKSGTVKRKIKNQSVFDLSRECLGYPEADFITLVNNMRFKIENCKVVNFNIENTNCLNNPSIETIYGNFNQFVSIFNTVTDVKKRLFE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (25-MER) p 25 NA AGCTATGACCATGATTACGAATTGC
DNA (4U 38-MER) t 38 NA CTGXACGAATTAAGCAATTCGTAATCATGGTCATAGCT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-10-27
Deposition Author(s): Ding, Q. , Gao, F. , Kuai, L. , Li, X.M. , Peng, Q. , Qi, J.X. , Shi, Y. , Wang, H. , Wang, Q. , Xie, Y.F.