Structural insights into photosystem ii supercomplex of a a siphonous green algae bryopsis corticulans from intertidal zone
PDB DOI: 10.2210/pdb9k7v/pdb
Classification: PHOTOSYNTHESIS Organism(s): Bryopsis Corticulans
Deposited: 2024-10-24 Deposition Author(s): Liu, X.Y. , Wang, W.D.
Method: ELECTRON MICROSCOPY Resolution: 3.07 Å
Structural insights into photosystem ii supercomplex of a a siphonous green algae bryopsis corticulans from intertidal zone
Primary Citation of Related Structures: 9K7V
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Photosystem II reaction center protein Z | Z | 62 | Bryopsis Corticulans | MILLFQVAVFALISLSFLLVVGVPVAFAYPNGWSENKGTIFSGVGLWFILVFLVGILNSFVV |
| Lhcb1 | 1 | 212 | Bryopsis Corticulans | VEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANRELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAFDPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAEHIADPVANNGFV |
| Lhcb1 | 4 | 212 | Bryopsis Corticulans | VEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANRELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAFDPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAEHIADPVANNGFV |
| Lhcb2 | 2 | 256 | Bryopsis Corticulans | MASALASKTFVGVQKPSVSTQQSKQVTRAAVEWYGPGRELWLGPYSSGAVPSYLTGEFPGDYGWDTAGLSADPESFRRYREIELIHARWAMMGTVGCLTPEALERYTGATFGESVWFKAGAQIFSDDGLNYLGKPELIHAQSILAIVWTQVLIMGFAEGYRVNGGPAGEGLDRLYPGEAFDPLGLADDPETFAELKIKEIKNGRLAMFAMFGFFVQAIQTGKGPVECWAEHVADPFGSNGFNVDQMSKFLFFSPSA |
| Lhcb2 | 5 | 256 | Bryopsis Corticulans | MASALASKTFVGVQKPSVSTQQSKQVTRAAVEWYGPGRELWLGPYSSGAVPSYLTGEFPGDYGWDTAGLSADPESFRRYREIELIHARWAMMGTVGCLTPEALERYTGATFGESVWFKAGAQIFSDDGLNYLGKPELIHAQSILAIVWTQVLIMGFAEGYRVNGGPAGEGLDRLYPGEAFDPLGLADDPETFAELKIKEIKNGRLAMFAMFGFFVQAIQTGKGPVECWAEHVADPFGSNGFNVDQMSKFLFFSPSA |
| Lhcb3 | 3 | 254 | Bryopsis Corticulans | MASTMMAKSLVGVTVHTPAVRGKASRHVTKAATEWYGPNRALWLGPYSGGDVPDYLTGEFPGDYGWDTAGLSADPEMFKQNRELEVIHSRWAMLGTVGCLTPELLAKYGNVDLPSPVWFSAGSQIFSDGGIDYLGNPNFVHAQSILAICGIQAVLMSLCEGYRCSGGPLGEPTDSLYPGESFDPFNFAADPETFSELKVKEIKNGRLAMFSMFGYFVQAIVTGKGPVENWAAHIADPANNNIFTDGVITRFAPN |
| Lhcb3 | 9 | 254 | Bryopsis Corticulans | MASTMMAKSLVGVTVHTPAVRGKASRHVTKAATEWYGPNRALWLGPYSGGDVPDYLTGEFPGDYGWDTAGLSADPEMFKQNRELEVIHSRWAMLGTVGCLTPELLAKYGNVDLPSPVWFSAGSQIFSDGGIDYLGNPNFVHAQSILAICGIQAVLMSLCEGYRCSGGPLGEPTDSLYPGESFDPFNFAADPETFSELKVKEIKNGRLAMFSMFGYFVQAIVTGKGPVENWAAHIADPANNNIFTDGVITRFAPN |
| Lhcb3 | 6 | 254 | Bryopsis Corticulans | MASTMMAKSLVGVTVHTPAVRGKASRHVTKAATEWYGPNRALWLGPYSGGDVPDYLTGEFPGDYGWDTAGLSADPEMFKQNRELEVIHSRWAMLGTVGCLTPELLAKYGNVDLPSPVWFSAGSQIFSDGGIDYLGNPNFVHAQSILAICGIQAVLMSLCEGYRCSGGPLGEPTDSLYPGESFDPFNFAADPETFSELKVKEIKNGRLAMFSMFGYFVQAIVTGKGPVENWAAHIADPANNNIFTDGVITRFAPN |
| Lhcb3 | U | 254 | Bryopsis Corticulans | MASTMMAKSLVGVTVHTPAVRGKASRHVTKAATEWYGPNRALWLGPYSGGDVPDYLTGEFPGDYGWDTAGLSADPEMFKQNRELEVIHSRWAMLGTVGCLTPELLAKYGNVDLPSPVWFSAGSQIFSDGGIDYLGNPNFVHAQSILAICGIQAVLMSLCEGYRCSGGPLGEPTDSLYPGESFDPFNFAADPETFSELKVKEIKNGRLAMFSMFGYFVQAIVTGKGPVENWAAHIADPANNNIFTDGVITRFAPN |
| Lhcb3 | P | 254 | Bryopsis Corticulans | MASTMMAKSLVGVTVHTPAVRGKASRHVTKAATEWYGPNRALWLGPYSGGDVPDYLTGEFPGDYGWDTAGLSADPEMFKQNRELEVIHSRWAMLGTVGCLTPELLAKYGNVDLPSPVWFSAGSQIFSDGGIDYLGNPNFVHAQSILAICGIQAVLMSLCEGYRCSGGPLGEPTDSLYPGESFDPFNFAADPETFSELKVKEIKNGRLAMFSMFGYFVQAIVTGKGPVENWAAHIADPANNNIFTDGVITRFAPN |
| Lhcb3 | 7 | 254 | Bryopsis Corticulans | MASTMMAKSLVGVTVHTPAVRGKASRHVTKAATEWYGPNRALWLGPYSGGDVPDYLTGEFPGDYGWDTAGLSADPEMFKQNRELEVIHSRWAMLGTVGCLTPELLAKYGNVDLPSPVWFSAGSQIFSDGGIDYLGNPNFVHAQSILAICGIQAVLMSLCEGYRCSGGPLGEPTDSLYPGESFDPFNFAADPETFSELKVKEIKNGRLAMFSMFGYFVQAIVTGKGPVENWAAHIADPANNNIFTDGVITRFAPN |
| LhcbS | S | 308 | Bryopsis Corticulans | MQVQAFFDRFTKPTTKKVSKAAGTKKAVPKKAAPASRKAAPAPKPASSGSGGFLSKGWFGESTNQANLDKWYGPDRALWLPSGLLDRSDVPSYLSGELPGDYGYDPLGIGKDPENVATLRAFELIHCRWAMLGAAGMLIPEALKANGADLKAGNWLDAGAEMLNGGTLDYFAVPWAVVANPLPLAVIAVIEVVLVGAAENYRRTGAGPKGYAPGIGQFESSAFDGLDSLYPGGPLDPFDLARDPEVFQELKIKEIKNGRLAMMATLGFYVQAAVTGEGPYANWSKHIADPFGYNLFTVIGNSDRVPTL |
| PsbX | X | 109 | Bryopsis Corticulans | MASFAAASTTRALVTRKTVGMPAMPAVRSRSARATQTVRASAQKENFVVPVVAATVVAASLVVPEIASATEATPSVKALLGSVVNGGLVLLGIAGAISLVSGFDPVARK |
| Photosystem II reaction center protein Psb30 | V | 33 | Bryopsis Corticulans | MNLEVIFQLLALLVVLTAGPLVIVLLASRDGNL |
| Photosystem II reaction center protein T | T | 31 | Bryopsis Corticulans | MEALVYTFFLIGTLGILFFSIFFREPPRIIK |
| LhcbG | G | 280 | Bryopsis Corticulans | MASAAMAQNAIGFQVSTRVSLEAELNSVGASMGLSCTNMVVDASARTQATKQVTRAAVEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANRELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAFDPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAEHIADPVANNGFVYATKFFGAQIF |
| LhcbG | N | 280 | Bryopsis Corticulans | MASAAMAQNAIGFQVSTRVSLEAELNSVGASMGLSCTNMVVDASARTQATKQVTRAAVEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANRELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAFDPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAEHIADPVANNGFVYATKFFGAQIF |
| LhcbG | Y | 280 | Bryopsis Corticulans | MASAAMAQNAIGFQVSTRVSLEAELNSVGASMGLSCTNMVVDASARTQATKQVTRAAVEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANRELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAFDPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAEHIADPVANNGFVYATKFFGAQIF |
| LhcbG | 8 | 280 | Bryopsis Corticulans | MASAAMAQNAIGFQVSTRVSLEAELNSVGASMGLSCTNMVVDASARTQATKQVTRAAVEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANRELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAFDPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAEHIADPVANNGFVYATKFFGAQIF |
| LhcbG | Q | 280 | Bryopsis Corticulans | MASAAMAQNAIGFQVSTRVSLEAELNSVGASMGLSCTNMVVDASARTQATKQVTRAAVEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANRELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAFDPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAEHIADPVANNGFVYATKFFGAQIF |
| Photosystem II CP47 reaction center protein | B | 508 | Bryopsis Corticulans | MGLPWYRVHTVVLNDPGRLIAVHLMHTSLVSGWAGSMAFYELAVFDPSDPVLNPMWRQGMFVLPFMTRLGITQSWGGWTISGETATNPGIWSYEGVATSHILLSGALFAAALWHWVYWDLELFRDPRTGKPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWVSDPFGITGSVQAIKPSWGADGFDPFNPGGIASHHIAAGILGILAGLFHLCVRPPQRLYNALSMGNIETVLSSSIAAVFWSAFVVCGTMWYGSAATPIELFGPTRYQWDNGFFANEIEKRVSESVASGKTLSEAWSQIPEKLAFYDYIGNNPAKGGLFRAGAMNSGDGIAVGWLGHSVFKDKNGTELHVRRMPTFFETFPVVLLDDDGIVRADIPFRRAESKYSIEQVGVSVTFYGGELDGVTFSDPSTVKKYARRSQLGEIFEFDRATLQSDGVFRSSPRGWFTFGHLCFGLLFFFGHIWHGARTIFRDVFAGIDTDLDEQVEFGAFQKVGDTSTRRQSV |
| PsbA | A | 327 | Bryopsis Corticulans | EGVSVWERFCAWITSTENRLYIGWFGCTRLPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFFLGICAYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNAGYKFGQETETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLALWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVVNTWADIINRANLGMEVMHERN |
| Cytochrome b559 subunit alpha | E | 82 | Bryopsis Corticulans | MSGTTGERPFSDILTSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTEDRQQAPLITDRFNALEQVKSLSEI |
| Photosystem II CP43 reaction center protein | C | 461 | Bryopsis Corticulans | VETLFNGTLTVGGRDQESTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLAGLGYGIGPGGEVVDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFGYVWKDKNKMTTILGIHLIILGIGAWLLVWKALYFGGVYDTWAPGGGDVRLITNPTVSPAVVFGYILKSPFGGDGWIVSVDNMEDIIGGHIWIGTLNIFGGIWHILTKPWAWARRAFVWSGEAYLSYSLAAISLMGFIACCMSWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLNKLKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINAVNFVSPRSWLATSHFSLGFFFFVGHLWHAGRARAAAAGFEKGIDRDNEPVLSLKPLD |
| Photosystem II D2 protein | D | 352 | Bryopsis Corticulans | MTIALGKSQTERGWFDLVDDWLRRDRFVFVGWSGLLLFPCAYLALGGWLTGITFITSWYTHGLASSFLEGCNFLTVAVSTPANSMGHSLLLLWGPEAQADFTRWFQLGGLWSFVALHGSFALIGFMLRQFEIARSLKLRPYNAIAFSAPISVFVSVFLIYPLGQQGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVLGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHEKLVFPEEVLPRGNAL |
| PsbW | W | 118 | Bryopsis Corticulans | MASVSNPFIIRGAALPSTANRTAFKPAARVAVHASMREDVKKFVAAGTCAPVLLASNPAFAAFVEERMNGDGTGRALGIDDSSLGLALVATFSLVWALFYVSQKDLGGDENDESGLTL |
| Photosystem II reaction center protein H | H | 75 | Bryopsis Corticulans | MPKNSGKDTGMVTGLGTLLSPLNSEYGKVAPGWGTTVLMAVFMALFAVFLVIILEIYNSDVLIDDIAMSWESLAQ |
| Photosystem II reaction center protein I | I | 36 | Bryopsis Corticulans | MLTLKIFVYIVVTFFVSLFIFGFLSDDPGRNPGQGN |
| Photosystem II reaction center protein K | K | 43 | Bryopsis Corticulans | MEILISKLPEAYAPFDPLVDVLPIIPVLFLLLAFVWQASVSFR |
| Photosystem II reaction center protein L | L | 38 | Bryopsis Corticulans | MAKPNPNKQTVELNRTSLYWGLLLIFVLAVLFSSYIFN |
| Photosystem II reaction center protein M | M | 33 | Bryopsis Corticulans | MEVNILGLIATTLFIIIPTSFLLILYVKTASQN |
| PsbR | R | 267 | Bryopsis Corticulans | MMSSSLQFGVANGSRVFMAKKGTKKVAKKPAGTKKASGGAKSSDTLWMPGLTRPAWLDGTMAGDRGFDPLCLSKPVEFLQFDIDELDQNAAVNKKGGVTGSFTTTTDEVSTETLQPYSEVFGIQRFRECELIHGRWCMLATTGCLVQELVTGVPWQKAGEVILQDGGSYFGLGLPFSVSQLVWIEVLLVGGAELYRNSELDTTKRCYPGGLFDPLNFGSGDPAKVDRLKEAEVKHGRLAMIAFLGFSVQALATGEGIFGSLSRAVTL |
| Cytochrome b559 subunit beta | F | 42 | Bryopsis Corticulans | MASKKSSYTYPIFTVRWLAVHGLAVPTIFFLGSITAMQFIQR |
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-10-24 Deposition Author(s): Liu, X.Y. , Wang, W.D.