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FASTA Sequence PDB Format mmCIF Format
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9K4C

Superfi cas9 - 22nt sgrna - dna ternary complex

PDB DOI: 10.2210/pdb9k4c/pdb

Classification: IMMUNE SYSTEM/DNA/RNA
Organism(s): Streptococcus Pyogenes , Synthetic Construct

Deposited: 2024-10-21
Deposition Author(s): Ma, L.J. , Zheng, R.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.84 Å

Literature

Superfi cas9 - 22nt sgrna - dna ternary complex

Ma, L.J. , Zheng, R.

Primary Citation of Related Structures: 9K4C


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas9/Csn1 A 1368 Streptococcus Pyogenes , Synthetic Construct MDKKYSIGLDIGTNSVGWAVITDEYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRICYLQEIFSNEMAKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLVDSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASGVDAKAILSARLSKSRRLENLIAQLPGEKKNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNTEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLVKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDREMIEERLKTYAHLFDDKVMKQLKRRRYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFMQLIHDDSLTFKEDIQKAQVSGQGDSLHEHIANLAGSPAIKKGILQTVKVVDELVKVMGRHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFLKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYPKLESEFVDGDDKVDDDDKMIAKSEDEIGDATAKYFFYSNIMNFFKTEITLANGEIRKRPLIETNGETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGGFSKESILPKRNSDKLIARKKDWDPKKYGGFDSPTVAYSVLVVAKVEKGKSKKLKSVKELLGITIMERSSFEKNPIDFLEAKGYKEVKKDLIIKLPKYSLFELENGRKRMLASAGELQKGNELALPSKYVNFLYLASHYEKLKGSPEDNEQKQLFVEQHKHYLDEIIEQISEFSKRVILADANLDKVLSAYNKHRDKPIREQAENIIHLFTLTNLGAPAAFKYFDTTIDRKRYTSTKEVLDATLIHQSITGLYETRIDLSQLGGD

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (50-MER) b 50 NA AGCTATGAGTGGCCCCTGTGGAGAGAAGCCTGTCCTGGAAGCCAGCCCCA
DNA (50-MER) c 50 NA TGGGGCTGGCTTCCAGGACAGGCTTCTCTCCACAGGGGCCACTCATAGCT
RNA (102-MER) d 102 NA CAGGACAGGCUUCUCUCCACAGGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUGGCACCGAGUCGGUGCUUUU
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-10-21
Deposition Author(s): Ma, L.J. , Zheng, R.