9K2R
Human t cell receptor (trav24*01/trbv27*01) in complex with hla-c*1202 and iy11 peptide
PDB DOI: 10.2210/pdb9k2r/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2024-10-18 Deposition Author(s): Aflalo, A. , Akahoshi, T. , Borrow, P. , Chikata, T. , Gatanaga, H. , Kita, S. , Kliszczak, A. , Kuroki, K. , Kusaka, H. , Kuse, N. , Lin, Z. , Maenaka, K. , Matsubara, H. , Nicastri, A. , Oka, S. , Ose, T. , Paes, W. , Parker, R. , Sakata, R. , Takiguchi, M. , Ternette, N. , Tomioka, N. , Watanabe, Y. , Yamashita, R.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.98 Å
Human t cell receptor (trav24*01/trbv27*01) in complex with hla-c*1202 and iy11 peptide
Aflalo, A. , Akahoshi, T. , Borrow, P. , Chikata, T. , Gatanaga, H. , Kita, S. , Kliszczak, A. , Kuroki, K. , Kusaka, H. , Kuse, N. , Lin, Z. , Maenaka, K. , Matsubara, H. , Nicastri, A. , Oka, S. , Ose, T. , Paes, W. , Parker, R. , Sakata, R. , Takiguchi, M. , Ternette, N. , Tomioka, N. , Watanabe, Y. , Yamashita, R.
Primary Citation of Related Structures: 9K2R
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| MHC class I antigen | A | 275 | Homo Sapiens , Synthetic Construct | SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRWEP |
| MHC class I antigen | D | 275 | Homo Sapiens , Synthetic Construct | SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRWEP |
| MHC class I antigen | G | 275 | Homo Sapiens , Synthetic Construct | SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRWEP |
| Beta-2-microglobulin | B | 100 | Homo Sapiens , Synthetic Construct | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | E | 100 | Homo Sapiens , Synthetic Construct | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | H | 100 | Homo Sapiens , Synthetic Construct | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| peptide from p51 RT | C | 11 | Homo Sapiens , Synthetic Construct | ILKEPVHGVYY |
| peptide from p51 RT | F | 11 | Homo Sapiens , Synthetic Construct | ILKEPVHGVYY |
| peptide from p51 RT | I | 11 | Homo Sapiens , Synthetic Construct | ILKEPVHGVYY |
| T cell receptor alpha chain | J | 204 | Homo Sapiens , Synthetic Construct | ILNVEQSPQSLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQPEDSATYLCYVPMDSNYQLIWGAGTKLIIKPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPE |
| T cell receptor alpha chain | L | 204 | Homo Sapiens , Synthetic Construct | ILNVEQSPQSLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQPEDSATYLCYVPMDSNYQLIWGAGTKLIIKPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPE |
| T cell receptor alpha chain | N | 204 | Homo Sapiens , Synthetic Construct | ILNVEQSPQSLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQPEDSATYLCYVPMDSNYQLIWGAGTKLIIKPDIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPE |
| T cell receptor beta chain | K | 241 | Homo Sapiens , Synthetic Construct | QVTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNVEVTDKGDVPEGYKVSRKEKRNFPLILESPSPNQTSLYFCASSLVGAGQPQHFGDGTRLSILEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
| T cell receptor beta chain | M | 241 | Homo Sapiens , Synthetic Construct | QVTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNVEVTDKGDVPEGYKVSRKEKRNFPLILESPSPNQTSLYFCASSLVGAGQPQHFGDGTRLSILEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
| T cell receptor beta chain | O | 241 | Homo Sapiens , Synthetic Construct | QVTQNPRYLITVTGKKLTVTCSQNMNHEYMSWYRQDPGLGLRQIYYSMNVEVTDKGDVPEGYKVSRKEKRNFPLILESPSPNQTSLYFCASSLVGAGQPQHFGDGTRLSILEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-10-18 Deposition Author(s): Aflalo, A. , Akahoshi, T. , Borrow, P. , Chikata, T. , Gatanaga, H. , Kita, S. , Kliszczak, A. , Kuroki, K. , Kusaka, H. , Kuse, N. , Lin, Z. , Maenaka, K. , Matsubara, H. , Nicastri, A. , Oka, S. , Ose, T. , Paes, W. , Parker, R. , Sakata, R. , Takiguchi, M. , Ternette, N. , Tomioka, N. , Watanabe, Y. , Yamashita, R.