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FASTA Sequence PDB Format mmCIF Format
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9JO8

Cryo-em structure of the mono-ddcbe bound to a dsdna substrate.

PDB DOI: 10.2210/pdb9jo8/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Burkholderia Cenocepacia H111 , Xanthomonas , Synthetic Construct

Deposited: 2024-09-24
Deposition Author(s): Bei, Y. , Jia, C. , Jiangchao, X. , Wenchao, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.0 Å

9jo8
Literature

Cryo-em structure of the mono-ddcbe bound to a dsdna substrate.

Bei, Y. , Jia, C. , Jiangchao, X. , Wenchao, X.

Primary Citation of Related Structures: 9JO8


Proteins
Molecule Chains Sequence Length Organism Sequence
TALE repeat protein targeting mitochondiral ND1-L gene. A 679 Burkholderia Cenocepacia H111 , Xanthomonas , Synthetic Construct MGSSDIADLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLG
Double-stranded DNA deaminase toxin A D 133 Burkholderia Cenocepacia H111 , Xanthomonas , Synthetic Construct GSYALGPYQISAPQLPAYNGQTVGTFYYVNDAGGLEGKVFISGGPTPYPNYVSAGHVESQSALFMRDNGISEGLVFHNNPKGTCGFCVNMIETLLPENAKMTVVPPEGVIPVKRGATGETKVFIGNSNGPKSP

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
TALE repeat protein recognized single-strand DNA sequence and mitochondrial ND4 gene sequence. b 33 NA GAATCTAGCCTAGCCGTTTCCTGATCAAATATC
a complementary strand of TALE repeat protein recognized single-strand DNA sequence and a complementary strand of mitochondrial ND4 gene sequence. c 33 NA GATATTTGATCAGGAAACGGCTAGGCTAGATTC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-09-24
Deposition Author(s): Bei, Y. , Jia, C. , Jiangchao, X. , Wenchao, X.