Structural insights into the psi-fcpi supercomplex from the coccolithophore emiliania huxleyi
PDB DOI: 10.2210/pdb9jj8/pdb
Classification: PHOTOSYNTHESIS Organism(s): Emiliania Huxleyi Ccmp1516
Deposited: 2024-09-13 Deposition Author(s): Li, Z.H. , Shen, L.L. , Wang, W.D.
Structural insights into the psi-fcpi supercomplex from the coccolithophore emiliania huxleyi
Li, Z.H. , Shen, L.L. , Wang, W.D.
Primary Citation of Related Structures: 9JJ8
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Light harvesting protein | A | 201 | Emiliania Huxleyi Ccmp1516 | MVVGMPSTVVSRSSGVAMAISKPSNAMPFLTAPPCQSSKLPGAETGFDPLYLSEFIDIKWAREAELKHGRICMLATVGYIMQEFFSLPGYPGYTPNPIEAVSSTPPEALAQIVLVLSIIEFNSNKDKWTMDTMFTDPAREPGNLGFDPLKFGENKETRERLAMAELKNGRLAMIAFSGMIHQTFVTGKPLFASLNDIFSSP |
| Light harvesting protein | M | 224 | Emiliania Huxleyi Ccmp1516 | MAMMLSSLAAPALLAPVAPIARAPAAASAKMALVDSMEGVGEETGGQIWDPLGISEAVSDEAVMWFRASELKHGRVAMLASVGYLVGAAKISFPGELAKGVTFASVAANGPYQAWDAVPQAGKLQILSIILALEWATEAKKPHYMRGGVPGKIEQLPFDGIQGLWAPKIKFWDPLNFTGALSAEQKARKRKAELKNGRLAMIGIISFITGHNLPGSVPALDSSF |
| Light harvesting protein | K | 198 | Emiliania Huxleyi Ccmp1516 | MLSLASPTACGFAAPLAPRSAVRSASPSMLAVTDLVGASTEVSNKVWDPLKLSENMDESNLKLVRAAELKHCRVAMLATVGWLWTATGTHFEGMLSTSSGVSFADVAAAGPLLGAAKVPAAGIWQMIAAIGALEVYWENKYPAAECGGDFGVPRVTQDPAKFKEIQLAELKNGRLAMIGIISFACAEAIPGSVPFYPF |
| Light harvesting protein | O | 219 | Emiliania Huxleyi Ccmp1516 | MQQLGCFSPPPMLAFASSPLSFSAPALARPAAALRGAASMGLAPPVEKSQALPFAERPAKLDGTLVGDVGFDPLGLSNILPIEWMREAELKHGRVCMLAVVGYIVVDKGLRAPGAEKLVAATSSFTAHDAAVQSGHMWALLLACGLFEIVGAGAIASTLNGGDRKPGEFALTGGFDRDAAKLERFKLAEIKHSRLAMMAFSGLVTQDALSHGATGFPYF |
| Photosystem I P700 chlorophyll a apoprotein A2 | B | 734 | Emiliania Huxleyi Ccmp1516 | MATKFPKFSQALAQDPATRRIWYGIATAHDLESHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFQQWVLNPLKVKPIAHAIWDPHFGQSAIKAFTRGGVSYPVNIATSGVYHWWYTVGMRTNEDLYFGALGLLVLSTTLLFAGWLHLQPKFRPGIAWFKNNESRLNHHLSGLFGVSSLAWSGHLIHVAIPESRGQHIRWNNFTSTLPHPEGLTPFFTGNWGLYAENPDTAQHIFGTSEGAGTAILTFLGGFHPQTQSMWLTDIAHHHLAIAVVFIFAGHMYRTNWGIGHSMKEILDAHVPPKGRLGAGHRGLFETITDSLHMQLGLALASLGVATSLVAQHMYALPSYAFMAKDYVTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEVNKDNVLARMLQHKEAIISHLSWVSLFLGFHTLGLYIHNDVCVAFGTPEKQILFEPVFAQFIQAASGKALYGFDVLLSSSTSAASVASSKIWLPGWMEAINSGKNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTISWVTFYWHWKHLTVWGGNAAAFNESSTYIMGWLRDYLWLNSSPLINGYNAFGMNAQAVWAWMFLFGHLIWATGFMFLISWRGYWQELIETLVWAHERTPIANLVKWRDKPVALSIVQARLVGLAHFTVGFIFTFAPFVIASTTGKFA |
| Photosystem I iron-sulfur center | C | 81 | Emiliania Huxleyi Ccmp1516 | MSHSVRVYDTCIGCTQCVRACPCDVLEMVPWDGCKAGQIASAPRAEDCIGCKRCETACPTDFLSVRVYLGSETTRSLGLTY |
| Photosystem I reaction center subunit II | D | 142 | Emiliania Huxleyi Ccmp1516 | MTSDVLNLQIPTPTFGGSTGGWLRAAEIEEKYAITWTSKKEQIFEMPTSGAAIMQKGENLLYLAKKEQCLALSTQLRTLFKISDYKIYRIFPNSEVQYLHPKDGVFPEKLNEGRIGVGNVGYSIGKNPNPVNVKFTGKNTFD |
| Photosystem I reaction center subunit IV | E | 131 | Emiliania Huxleyi Ccmp1516 | MRSALLLALAAPAAALAPGSMLSSSRVVCRGGAPDMIERGSKVRVLRPESYWFQECGSVATIAKGGDRYPVVVRFEKVNYPGVAPNNFALDELGEVEAPAKKKAAKAAPAAKEGAPAAKAAPAAKEVAAKK |
| Photosystem I reaction center subunit III | F | 184 | Emiliania Huxleyi Ccmp1516 | MKVLLNWLLVASLFAASPKAAFADVSGLTPCKDSAVFKKRLDGSVKKLQARLANYTEGTPAYLALEQQIDQTKARFAKYGDKGLLCGADGLPHLIADGRPDHAGEFVIPAFGFLYIAGWIGWAGRSYLQFSKKTDKPNENEIIINVPVALGMMSGAFLWPLAAWKELINGQLLVPGDEVTVSPR |
| Light harvesting protein | G | 204 | Emiliania Huxleyi Ccmp1516 | MLALTSCSGPSFAAPLAPATRAARGAASPTMGVETELGATGPLGYWDPFGFSVRNPERFNRYRAVELKHGRIAMAATTGYMVQSFLRWPGYLSTSANIKFADLPNGIAAFKAIPPAGLFQILLFIGAMEAFTWRYYEGPWPGKVPEGKAPGDVAGDLWVRYTDPEEKAFKLNAEINNGRAAMMGSLGMLMHDHILGTWVPPGFE |
| PsaR | H | 133 | Emiliania Huxleyi Ccmp1516 | MKGALAFLCLLGSAAAFAPAALRPAVMQRSVAAAPAAAGAVMVDRSEAADTWWGDKDYPPSIVLGIGKDVPSSIFGVTSGLAFAIGVYCVAQSNLVNILSGSTVNGFYVAGALLVPYSWGLHVAAWIQKQNGK |
| Photosystem I reaction center subunit IX | J | 40 | Emiliania Huxleyi Ccmp1516 | MSKDLLKYLSTAPVLLTAWMSLTAGMIIEIQRFFPDSLSF |
| Photosystem I reaction center subunit XI | L | 145 | Emiliania Huxleyi Ccmp1516 | MSEFVKPYNNDPFVGNLSTPVTTSTATKLYLGNLPIYRKGLSPLLRGLEIGMAHGYFLIGPFYILGPLRNSPNALLVGLFSAFGLILILTLGLTIYGLASFQGTEGGENLESAKGWRNFTSGFSIGAFGGASVAYVLLDNISFFA |
| Light harvesting protein | P | 224 | Emiliania Huxleyi Ccmp1516 | MAMMLSSLAAPALLAPVAPIARAPAAASAKMALVDSMEGVGEETGGQIWDPLGISEAVSDEAVMWFRASELKHGRVAMLASVGYLVGAAKISFPGELAKGVTFASVAANGPYQAWDAVPQAGKLQILSIILALEWATEAKKPHYMRGGVPGKIEQLPFDGIQGLWAPKIKFWDPLNFTGALSAEQKARKRKAELKNGRLAMIGIISFITGHNLPGSVPALDSSF |
| Light harvesting protein | W | 224 | Emiliania Huxleyi Ccmp1516 | MAMMLSSLAAPALLAPVAPIARAPAAASAKMALVDSMEGVGEETGGQIWDPLGISEAVSDEAVMWFRASELKHGRVAMLASVGYLVGAAKISFPGELAKGVTFASVAANGPYQAWDAVPQAGKLQILSIILALEWATEAKKPHYMRGGVPGKIEQLPFDGIQGLWAPKIKFWDPLNFTGALSAEQKARKRKAELKNGRLAMIGIISFITGHNLPGSVPALDSSF |
| Light harvesting protein | Q | 257 | Emiliania Huxleyi Ccmp1516 | MLATASTLSLSYAAPAAPAGASLRHARPAAAPPLMETKADLEALAKDLNPAVGFWDPLALSDYSFWGTSQEATIGFLREAEIKHGRIAMAGFVGYIVHSNDIRWTFDKVAASVPTGLPAPAVWDAIPDIAKWQIILFVGVMESWRENKVVLEAEGQKHYMSGGKPGYFPSFDLLPHPVPFPLFDPFGISKRATEEKKAKGRLAEINNGRLAMIGLFGFLSEATVPGSVPFLKGVVPAYTGEVMAPFTQNIFTAPTAL |
| Light harvesting protein | R | 219 | Emiliania Huxleyi Ccmp1516 | MLSLTVNSVSFNGPALAPRVAPAAAAGVRMGVSDMEGTGPETGGKVFDPMGLSKIASAETLAWYRAAELKHSRVAMAAVTGWAWVSSGGPLFPGYLSVEQGVTFESLGRDGYAAWAAVPEAGKFQILGVIGILEILSESAVKPHYMAGGTPGKVPLLWDPLGFTAKLSPETLARKRLAELKNGRLAMIGVMSLVSAHFIPNSVPLLPGSVXXXXXXXXX |
| Light harvesting protein | V | 219 | Emiliania Huxleyi Ccmp1516 | MLSLTVNSVSFNGPALAPRVAPAAAAGVRMGVSDMEGTGPETGGKVFDPMGLSKIASAETLAWYRAAELKHSRVAMAAVTGWAWVSSGGPLFPGYLSVEQGVTFESLGRDGYAAWAAVPEAGKFQILGVIGILEILSESAVKPHYMAGGTPGKVPLLWDPLGFTAKLSPETLARKRLAELKNGRLAMIGVMSLVSAHFIPNSVPLLPGSVXXXXXXXXX |
| Light harvesting protein | X | 255 | Emiliania Huxleyi Ccmp1516 | MLALTSSSLSFAPAVAPRAAVSGPVMSAKADLEAFAKECNPVVGYWDPLGLADLPLWGQDQDAVIGWLRHSEIKHGRIAMAGFVGYIAHANGFRFGGIGPQNVVPEGASAPEVWDSIPFLAKLQIIGAIGVLEHISEDKNFLAADGMKHYMRGGKPGYFPTFSANVHPMPLNLFDPFKWSKNASPEKKAKGLVTETNNGRLAMLGLFGFLSESKIPGSVPALSGIIPSYDGDYMQPFLPTGPDTSLWTIGNLWAN |
| Light harvesting protein | 5 | 219 | Emiliania Huxleyi Ccmp1516 | MLSLTVNSVSFNGPALAPRVAPAAAAGVRMGVSDMEGTGPETGGKVFDPMGLSKIASAETLAWYRAAELKHSRVAMAAVTGWAWVSSGGPLFPGYLSVEQGVTFESLGRDGYAAWAAVPEAGKFQILGVIGILEILSESAVKPHYMAGGTPGKVPLLWDPLGFTAKLSPETLARKRLAELKNGRLAMIGVMSLVSAHFIPNSVPLLPGSVXXXXXXXXX |
| Light harvesting protein | S | 255 | Emiliania Huxleyi Ccmp1516 | MLALTSSSLSFAPAVAPRAAVSGPVMSAKADLEAFAKECNPVVGYWDPLGLADLPLWGQDQDAVIGWLRHSEIKHGRIAMAGFVGYIAHANGFRFGGIGPQNVVPEGASAPEVWDSIPFLAKLQIIGAIGVLEHISEDKNFLAADGMKHYMRGGKPGYFPTFSANVHPMPLNLFDPFKWSKNASPEKKAKGLVTETNNGRLAMLGLFGFLSESKIPGSVPALSGIIPSYDGDYMQPFLPTGPDTSLWTIGNLWAN |
| Light harvesting protein | 4 | 255 | Emiliania Huxleyi Ccmp1516 | MLALTSSSLSFAPAVAPRAAVSGPVMSAKADLEAFAKECNPVVGYWDPLGLADLPLWGQDQDAVIGWLRHSEIKHGRIAMAGFVGYIAHANGFRFGGIGPQNVVPEGASAPEVWDSIPFLAKLQIIGAIGVLEHISEDKNFLAADGMKHYMRGGKPGYFPTFSANVHPMPLNLFDPFKWSKNASPEKKAKGLVTETNNGRLAMLGLFGFLSESKIPGSVPALSGIIPSYDGDYMQPFLPTGPDTSLWTIGNLWAN |
| Light harvesting protein | 7 | 255 | Emiliania Huxleyi Ccmp1516 | MLALTSSSLSFAPAVAPRAAVSGPVMSAKADLEAFAKECNPVVGYWDPLGLADLPLWGQDQDAVIGWLRHSEIKHGRIAMAGFVGYIAHANGFRFGGIGPQNVVPEGASAPEVWDSIPFLAKLQIIGAIGVLEHISEDKNFLAADGMKHYMRGGKPGYFPTFSANVHPMPLNLFDPFKWSKNASPEKKAKGLVTETNNGRLAMLGLFGFLSESKIPGSVPALSGIIPSYDGDYMQPFLPTGPDTSLWTIGNLWAN |
| Light harvesting protein | Y | 260 | Emiliania Huxleyi Ccmp1516 | MSFADEFTFDSKPWSSSEIKDKAGLEALAKKLNPTVGLWDPLGIAETSPETIGWFRHAEIKHGRVAMAAFVGYCVQSNGIHFPWNIQGWQGTPVVSFADIAAAGGPADQWDALSTPAKLQILGVIGFLEMWSETSVVLKADGQEHYVRGGKPGYFPKLSRSDEMAFPHPVPLNLWDPFGFTSKMTPERKEKALLAEVNNGRLAMIGIFGMISASKGLQVPGLDTVGIKPYAGEVMAPFAAGDASLPFVSGMLEKIGTYGY |
| Light harvesting protein | Z | 260 | Emiliania Huxleyi Ccmp1516 | MSFADEFTFDSKPWSSSEIKDKAGLEALAKKLNPTVGLWDPLGIAETSPETIGWFRHAEIKHGRVAMAAFVGYCVQSNGIHFPWNIQGWQGTPVVSFADIAAAGGPADQWDALSTPAKLQILGVIGFLEMWSETSVVLKADGQEHYVRGGKPGYFPKLSRSDEMAFPHPVPLNLWDPFGFTSKMTPERKEKALLAEVNNGRLAMIGIFGMISASKGLQVPGLDTVGIKPYAGEVMAPFAAGDASLPFVSGMLEKIGTYGY |
| Light harvesting protein | T | 211 | Emiliania Huxleyi Ccmp1516 | MRGVVRSGLAPRMGVETMEGVGPETGNKVFDPVGFATLGGDETLAFFRHAEIKHGRVAMAAMVGFLFHINHIHFPGYLSPTAGVTFEQLSAVGPFEAWNRIPLLGQWKIFWTIPGLEHGSECLDPAGPYTKGGPPGNPKFLKNFWDPPGFPKKLIEAQKGEKLFSNLKNGRLAMIGIASVCAATAVPGSVPLLANAPALTGPGFALPFGTF |
| Light harvesting protein | U | 198 | Emiliania Huxleyi Ccmp1516 | MLSLALSPLSLSGLAPRSAVSSSRVAAPQMVQSKSMPMMEAPEHLQGMVGNVDFDPLGLSSPNNIKWMREAELKHGRMSMLAWTGYVAVDLGLRFPGARYAELNSFNAHDVVAKKELFLLLLWVGTFETIGASQIYDMSIDQSERKPGDFGFDPLRLLKSPEAPKYYEAELVHGRAAMLAFSAVVTQSALGNTAFPYF |
| Light harvesting protein | 0 | 254 | Emiliania Huxleyi Ccmp1516 | MLLAGSSALSLSYVAPAAPAAAVRGGAVRMESLSDLKTLATGLNPVVGYWDPLKLGEAEFWDNTNEETIGWLRHAEIKHGRVAMAGFVGFIVQANGIKFPWAPFNAITSTSPPEQWDQLPDAAKWQIILGVGFLEWWSEIRVDGTPHYMKGGKPGYVPDFDATPDQLPHWVGLNLYDPLKWSKGASAEKKQKGLLTELNNGRLAMLGIMGFVSEAKVPGSVPLLKGLVAPYTGEVMAPFATDIDWSSWAYIPGA |
| Light harvesting protein | 1 | 253 | Emiliania Huxleyi Ccmp1516 | MLSASVALSAGSAAITAPVAAPGRGAVRAAAPALMDKSGLEGFAKELNPVVGYWDPLNLSNGEFWGDSNSATIGFLRESEIKHGRVAMAGFVGYIVHANDIRFPWDKVAMAAPKGLSPQELWDVTPEAAKWQIILTIAFLEFWRENSYILSKEGEQHYMRGGKPGYFPTFSELPHPVPFNLFDPFGFSKNASPEKKAKGLLAEVNNGRLAMIGLMGFLSEAKVPGSVPALANVGIRPYAGEVMAPFDANFHLF |
| Light harvesting protein | 3 | 268 | Emiliania Huxleyi Ccmp1516 | MLSLASASTLSLAPAALMRAPAVRTAAPVMESKAELESLAGKLNPVIGYWDPLNLADYDQWSQGQEAAIGFLRHAEIKHGRVAMAAFVGYIVQSNGICWPWALTGGPNGVMHSDILAAGGPADQWDALPTASKLQILLFVGGLELWSENSYVLGLSGEKHYMRGGKPGFFPSIKKGGIPHPVPFDLFDPFGLSKNASPEKKAKGLLAEINNGRLAMLGIMAFVSESKVPGSVPALAGKIAPYSGEVMAPFAASDNLPFVADMLKSPLF |
| Light harvesting protein | 8 | 250 | Emiliania Huxleyi Ccmp1516 | MLAAAVSTPLSFAGAAAAPLARASAPAMSALPELSKKLNPVLGYWDPLNLAELNFWGAGDDATVGFLRHAEIKHGRVAMAAFVGYCVQSNVHFPWAPFNSIPTNIAPAEQWAQLPEAAKWQIILFVGFLEVYSEHSFILEKYGQKHYMKGGKPGFFPDFDTMVHPVPLNLWDPLKAYKGASAERKADGLLKEVNNGRLAMIGIMGFCAEARVPGAVPALSNIAHYAGDPMAPFAANFHLPGFASXXXXXX |
| Light harvesting protein | 6 | 250 | Emiliania Huxleyi Ccmp1516 | MLAAAVSTPLSFAGAAAAPLARASAPAMSALPELSKKLNPVLGYWDPLNLAELNFWGAGDDATVGFLRHAEIKHGRVAMAAFVGYCVQSNVHFPWAPFNSIPTNIAPAEQWAQLPEAAKWQIILFVGFLEVYSEHSFILEKYGQKHYMKGGKPGFFPDFDTMVHPVPLNLWDPLKAYKGASAERKADGLLKEVNNGRLAMIGIMGFCAEARVPGAVPALSNIAHYAGDPMAPFAANFHLPGFASXXXXXX |
| Light harvesting protein | 9 | 245 | Emiliania Huxleyi Ccmp1516 | MALLSLAPSCLGLATPLRAAPPLASSRAAAVSMDYSKEELATALNPVVGYFDPLGLATADFWSQGNEATWGWLRHAEIKHGRVAMFAFVGYIAQYNGLHFGFPLSLPESPSYAAGLTPPEQWDALPLLAKAQIFTFIGFLEFWSELGMETHYMKGGRPGDYPDFPKAGVIPVTPVKVFNLYDPFGFAGKRSEEQKAKGLLAEINNGRAAMIGIMAFLAEQKIPGSVPWGPHLKPYAGEVMAPFMS |
| Photosystem I reaction center subunit VIII | I | 36 | Emiliania Huxleyi Ccmp1516 | MSASFLPSILTPVVTLVFPGLMFALFFVLIEQEEIA |
| Light harvesting protein | 2 | 260 | Emiliania Huxleyi Ccmp1516 | MSFADEFTFDSKPWSSSEIKDKAGLEALAKKLNPTVGLWDPLGIAETSPETIGWFRHAEIKHGRVAMAAFVGYCVQSNGIHFPWNIQGWQGTPVVSFADIAAAGGPADQWDALSTPAKLQILGVIGFLEMWSETSVVLKADGQEHYVRGGKPGYFPKLSRSDEMAFPHPVPLNLWDPFGFTSKMTPERKEKALLAEVNNGRLAMIGIFGMISASKGLQVPGLDTVGIKPYAGEVMAPFAAGDASLPFVSGMLEKIGTYGY |
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-09-13 Deposition Author(s): Li, Z.H. , Shen, L.L. , Wang, W.D.