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9JHK

Cryo-em structure of cpago_gdna-tg_dsdna monomeric ternary complex

PDB DOI: 10.2210/pdb9jhk/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Clostridium Perfringens , Synthetic Construct

Deposited: 2024-09-10
Deposition Author(s): Li, S. , Liu, Y. , Zhang, K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.42 Å

9jhk
Literature

Cryo-em structure of cpago_gdna-tg_dsdna monomeric ternary complex

Li, S. , Liu, Y. , Zhang, K.

Primary Citation of Related Structures: 9JHK


Proteins
Molecule Chains Sequence Length Organism Sequence
Clostridium perfringens Argonaute A 751 Clostridium Perfringens , Synthetic Construct MVGGYKVSNLTVEAFEGIGSVNPMLFYQYKVTGKGKYDNVYKIIKSARYKMHSKNRFKPVFIKDDKLYTLEKLPDIEDLDFANINFVKSEVLSIEDNMSIYGEVVEYYINLKLKKVKVLGKYPKYRINYSKEILSNTLLTRELKDEFKKSNKGFNLKRKFRISPVVNKMGKVILYLSCSADFSTNKNIYEMLKEGLEVEGLAVKSEWSNISGNLVIESVLETKISEPTSLGQSLIDYYKNNNQGYRVKDFTDEDLNANIVNVRGNKKIYMYIPHALKPIITREYLAKNDPEFSKEIEQLIKMNMNYRYETLKSFVNDIGVIEELNNLSFKNKYYEDVKLLGYSSGKIDEPVLMGAKGIIKNKMQIFSNGFYKLPEGKVRFGVLYPKEFDGVSRKAIRAIYDFSKEGKYHGESNKYIAEHLINVEFNPKECIFEGYELGDITEYKKAALKLNNYNNVDFVIAIVPNMSDEEIENSYNPFKKIWAELNLPSQMISVKTAEIFANSRDNTALYYLHNIVLGILGKIGGIPWVVKDMKGDVDCFVGLDVGTREKGIHYPACSVVFDKYGKLINYYKPNIPQNGEKINTEILQEIFDKVLISYEEENGAYPKNIVIHRAGFSREDLDWYENYFGKKNIKFNIIEVKKSTPLKIASINEGNITNPEKGSYILRGNKAYMVTTDIKENLGSPKPLKIEKSYGDIDMLTALSQIYALTQIHVGATKSLRLPITTGYADKICKAIEFIPQGRVDNRLFFL

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3') c 21 NA TGAGGTAGTAGGTTGTATAGT
DNA (29-MER) e 29 NA ATATACTATACAACCTACTACCTCATATA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-09-10
Deposition Author(s): Li, S. , Liu, Y. , Zhang, K.