9JFS
Structure of cas12p-trxa-guide rna-target dna complex(29nt ts and 11nt nts)
PDB DOI: 10.2210/pdb9jfs/pdb
Classification: RNA BINDING PROTEIN/RNA/DNA Organism(s): Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct
Deposited: 2024-09-05 Deposition Author(s): Ji, Q.J. , Wang, Y.J. , Wang, Z.P.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.67 Å
Structure of cas12p-trxa-guide rna-target dna complex(29nt ts and 11nt nts)
Ji, Q.J. , Wang, Y.J. , Wang, Z.P.
Primary Citation of Related Structures: 9JFS
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Cas12p | A | 741 | Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct | MGSSHHHHHHSSGLVPRGSMSDSEVNQEAKPEVKPEVKPETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGIRIQADQTPEDLDMEDNDIIEAHREQIGGHSSLEVLFQGPMKTIKIKIKLTTDQVQLCDRYLEELTWLWNLTLSNQLHNHCVTWYAWAAKLSADLDKATEKLDKLKPEQQQLVKDYYRTKDKPRLTKKEQELVAKFDIFARWSSFSLDGIIPVPLRLGNSGYEGLSCQIATGGNYWKRDENINIPINTKKGIIHVKGYKLVKGDKLWQRIEIVPHKYRTFPGGKFEGRELTTLEKLDNVNGLNTLRAFQNLPDLQVSSHYIGGLLAFFKESWSAFLDPKRMNSRKPKFKKDSDKITTLSNNQCAPNRIDVNKNIVTVTGFSPITIIDKNWVKRLNLSQVLPRTYMLTQNPSGYYINIVIAHPLHEEKIALVKKLPKVKKEFGEDSQEYEDIKSKIKFLEQQIKESSIVKGKDLSVGIDPGVQAVVSTDHGALFLPNLTRERVSIHIEELQSRLDNAELINDKKWKSLGNKTPRIKTKNETKLQEKISRLHERGANSSNAFNHKLSTRLSRTYEHIAWEDTQINNLLKQVEPKALPEGVGYAHNGASAKRGLNWIMRQRCLSDLKAKTKQKTENRGGNFHEPPANYSSQTCHCCGQKGERRSQHEFVCKNSDCKLFDIPQQADTNAARNHKQNGGFELGEVKYHNVKLVYQKPK |
| Thioredoxin | E | 109 | Escherichia Coli Bl21(De3) , Unidentified , Synthetic Construct | MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (246-MER) | b | 246 | NA | AGAUUUAAGAAAAAACGCUUGACAAAGUAAUAAGAUUAGGCUAAUAUUAAAUUACCGCAGUUUGGGCGGGCAGCUAAUAAUAUUAGCUUAUGACUUCUAAGGCUUUUGCCUAAAAAGUAAGGGGGAAGGCGACAACCCCCAAAGACCAGCCGGAACUAUGGCUGGCAACUAUACCCUCUCUUUUGGAAACUUGCAACUAAGACUGGGGACUGAGGAUAGUUGAAACUGUCCUCUUCCUCUUUAGCG |
| DNA (29-MER) | c | 29 | NA | CGCTAAAGAGGAAGAGGACATACAGTTGA |
| DNA (5'-D(P*TP*CP*AP*AP*CP*TP*GP*TP*AP*TP*G)-3') | d | 11 | NA | TCAACTGTATG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-09-05 Deposition Author(s): Ji, Q.J. , Wang, Y.J. , Wang, Z.P.