Crystal structure of sars-cov-2 rbd in complex with a neutralizing antibody scfv n1
PDB DOI: 10.2210/pdb9jeb/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2
Deposited: 2024-09-03 Deposition Author(s): Guo, K. , Guo, Y. , Zhang, N.
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| N1 scFv | A | 247 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVHLVESGGGVVQPGRSLKLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISHDGSSKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEFYDSGNYRPELFDYWGQGTTITVSSGGGGSGGGGSGGGGSEIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIK |
| N1 scFv | C | 247 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | EVHLVESGGGVVQPGRSLKLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISHDGSSKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEFYDSGNYRPELFDYWGQGTTITVSSGGGGSGGGGSGGGGSEIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIK |
| Spike protein S1 | B | 197 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKK |
| Spike protein S1 | D | 197 | Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 | TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKK |
Method: X-RAY DIFFRACTION