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FASTA Sequence PDB Format mmCIF Format
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9JC6

Human h2bw2 nucleosome

PDB DOI: 10.2210/pdb9jc6/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2024-08-28
Deposition Author(s): Ding, D.B. , Ishibashi, T. , Nguyen, T.T.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.34 Å

9jc6
Literature

Human h2bw2 nucleosome

Ding, D.B. , Ishibashi, T. , Nguyen, T.T.

Primary Citation of Related Structures: 9JC6


Proteins
Molecule Chains Sequence Length Organism Sequence
Histone H3.1 A 135 Homo Sapiens , Synthetic Construct ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H3.1 E 135 Homo Sapiens , Synthetic Construct ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Histone H4 B 102 Homo Sapiens , Synthetic Construct SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H4 F 102 Homo Sapiens , Synthetic Construct SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Histone H2A type 1-B/E C 129 Homo Sapiens , Synthetic Construct SGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Histone H2A type 1-B/E G 129 Homo Sapiens , Synthetic Construct SGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Isoform 2 of Histone H2B type F-M D 147 Homo Sapiens , Synthetic Construct AEASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALRTSLCAIWQQRK
Isoform 2 of Histone H2B type F-M H 147 Homo Sapiens , Synthetic Construct AEASSETTSEEGQSIQEPKEANSTKAQKQKRRGCRGSRRRHANRRGDSFGDSFTPYFPRVLKQVHQGLSLSQEAVSVMDSMIHDILDRIATEAGQLAHYTKRVTITSRDIQMAVRLLLPGKMGKLAEAQGTNAALRTSLCAIWQQRK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
147-mer DNA i 147 NA ATCGAGAATCCCGGTGCCGAGGCCGCTCAATTGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAACCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCGAT
147-mer DNA j 147 NA ATCGGATGTATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGGGGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCTCGGCACCGGGATTCTCGAT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-28
Deposition Author(s): Ding, D.B. , Ishibashi, T. , Nguyen, T.T.