Cryo-em structure of outward state anhydromuropeptide permease (ampg) complex with glcnac-1,6-anhmurnac
PDB DOI: 10.2210/pdb9j9z/pdb
Classification: MEMBRANE PROTEIN Organism(s): Escherichia Coli , Homo Sapiens , Synthetic Construct , Yokenella Regensburgei
Deposited: 2024-08-23 Deposition Author(s): Chang, N. , Cho, H. , Kim, U.
Method: ELECTRON MICROSCOPY Resolution: 2.97 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| anti-BRIL Fab Heavy chain | H | 225 | Escherichia Coli , Homo Sapiens , Synthetic Construct , Yokenella Regensburgei | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK |
| anti-BRIL Fab Nanobody | K | 120 | Escherichia Coli , Homo Sapiens , Synthetic Construct , Yokenella Regensburgei | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS |
| anti-BRIL Fab Light chain | L | 212 | Escherichia Coli , Homo Sapiens , Synthetic Construct , Yokenella Regensburgei | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR |
| Muropeptide transporter,Soluble cytochrome b562 | A | 589 | Escherichia Coli , Homo Sapiens , Synthetic Construct , Yokenella Regensburgei | YLRIFQQPKSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIWFFSLVGQAYVFKFLWSPVMDRYTPPFLGRRRGWLVTTQILLLIAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGTGAAISVLGYRLGMLVSGGLALWMADKWLGWQGMYWLMAALLVPCIIATLLAPEPSADLADNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLGVPRTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGMVNKTLGWIATIIGALYGGVLMQRLSLFRALLIFGILQGVSNAGYWLLSITDKHLMSMAVAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPIAGWFVEAHGWPTFYLFSVFAAVPGILLLLICRKTLEYTQQTESFMMRRHFSGAYQFALYLLLLGCLLLALWLIMLALNAIDYTSFSFLAGLLEVAALIAIAGVLLGAILDYLALRRTEE |
Method: ELECTRON MICROSCOPY