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9J66

Cryo-em structure of the sars-cov-2 s 6p trimer in complex with the human neutralizing antibody fab fragment cav-c65 (local refinement)

PDB DOI: 10.2210/pdb9j66/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2

Deposited: 2024-08-15
Deposition Author(s): Chen, Y. , Gong, P. , Jing, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.55 Å

9j66
Literature

Cryo-em structure of the sars-cov-2 s 6p trimer in complex with the human neutralizing antibody fab fragment cav-c65 (local refinement)

Chen, Y. , Gong, P. , Jing, X.

Primary Citation of Related Structures: 9J66


Proteins
Molecule Chains Sequence Length Organism Sequence
CAV-C65 Heavy chain B 231 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGRIIPIFGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARTPLEMATEEGYFDYWGQGTLVTVSSASVRSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCSG
CAV-C65 Light chain C 214 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 DIQMTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQTPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Spike protein S1 A 195 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP
Spike protein S1 D 195 Homo Sapiens , Severe Acute Respiratory Syndrome Coronavirus 2 TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-15
Deposition Author(s): Chen, Y. , Gong, P. , Jing, X.