9J4V
Structural basis for recognition of sars-cov-2 conserved nucleocapside epitopes by dominant t cell receptors
PDB DOI: 10.2210/pdb9j4v/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2024-08-10 Deposition Author(s): Wu, D.C. , Yuan, P.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.98 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HLA class I histocompatibility antigen, B alpha chain | A | 276 | Homo Sapiens , Synthetic Construct | MGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE |
| HLA class I histocompatibility antigen, B alpha chain | C | 276 | Homo Sapiens , Synthetic Construct | MGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE |
| Beta-2-microglobulin | B | 100 | Homo Sapiens , Synthetic Construct | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | D | 100 | Homo Sapiens , Synthetic Construct | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Nucleoprotein | E | 9 | Homo Sapiens , Synthetic Construct | SPRWYFYYL |
| Nucleoprotein | F | 9 | Homo Sapiens , Synthetic Construct | SPRWYFYYL |
Experimental Data
Method: X-RAY DIFFRACTION