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9IUB

Cryo-em structure of the large serine recombinase bxb1 in complex with attp and attb (gt/tt cdn) in the pre-strand exchange state (attb-r)

PDB DOI: 10.2210/pdb9iub/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Mycobacterium Phage Bxb1 , Synthetic Construct

Deposited: 2024-07-20
Deposition Author(s): Hiraizumi, M. , Nishimasu, H. , Soma, T. , Yamashita, K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.08 Å

9iub
Literature

Cryo-em structure of the large serine recombinase bxb1 in complex with attp and attb (gt/tt cdn) in the pre-strand exchange state (attb-r)

Hiraizumi, M. , Nishimasu, H. , Soma, T. , Yamashita, K.

Primary Citation of Related Structures: 9IUB


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
attB-R g2 22 NA CTCCGTCGTCAGGATCATCCGG
attB-R h2 24 NA CCGGATGATCCTGACGACGGAGTT

Proteins
Molecule Chains Sequence Length Organism Sequence
Integrase D 500 Mycobacterium Phage Bxb1 , Synthetic Construct MRALVVIRLSRVTDATTSPERQLESCQQLCAQRGWDVVGVAEDLDVSGAVDPFDRKRRPNLARWLAFEEQPFDVIVAYRVDRLTRSIRHLQQLVHWAEDHKKLVVSATEAHFDTTTPFAAVVIALMGTVAQMELEAIKERNRSAAHFNIRAGKYRGSLPPWGYLPTRVDGEWRLVPDPVQRERILEVYHRVVDNHEPLHLVAHDLNRRGVLSPKDYFAQLQGREPQGREWSATALKRSMISEAMLGYATLNGKTVRDDDGAPLVRAEPILTREQLEALRAELVKTSRAKPAVSTPSLLLRVLFCAVCGEPAYKFAGGGRKHPRYRCRSMGFPKHCGNGTVAMAEWDAFCEEQVLDLLGDAERLEKVWVAGSDSAVELAEVNAELVDLTSLIGSPAYRAGSPQREALDARIAALAARQEELEGLEARPSGWEWRETGQRFGDWWREQDTAAKNTWLRSMNVRLTFDVRGGLTRTIDFGDLQEYEQHLRLGSVVERLHTGMS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-20
Deposition Author(s): Hiraizumi, M. , Nishimasu, H. , Soma, T. , Yamashita, K.