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FASTA Sequence PDB Format mmCIF Format
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9IT2

Cryo-em structure of urease from ureaplasma parvum

PDB DOI: 10.2210/pdb9it2/pdb

Classification: HYDROLASE
Organism(s): Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040)

Deposited: 2024-07-19
Deposition Author(s): Fujita, J. , Namba, K. , Wu, H.N. , Yanagihara, I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.03 Å

9it2
Literature

Cryo-em structure of urease from ureaplasma parvum

Fujita, J. , Namba, K. , Wu, H.N. , Yanagihara, I.

Primary Citation of Related Structures: 9IT2


Proteins
Molecule Chains Sequence Length Organism Sequence
Urease subunit gamma A 101 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MNLSLREVQKLLITVAADVARRRLARGLKLNYSEAVALITDHVMEGARDGKLVADLMQSAREVLRVDQVMEGVDTMVSIIQVEVTFPDGTKLVSVHDPIYK
Urease subunit gamma D 101 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MNLSLREVQKLLITVAADVARRRLARGLKLNYSEAVALITDHVMEGARDGKLVADLMQSAREVLRVDQVMEGVDTMVSIIQVEVTFPDGTKLVSVHDPIYK
Urease subunit gamma G 101 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MNLSLREVQKLLITVAADVARRRLARGLKLNYSEAVALITDHVMEGARDGKLVADLMQSAREVLRVDQVMEGVDTMVSIIQVEVTFPDGTKLVSVHDPIYK
Urease subunit beta B 124 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MSGSSSQFSPGKLVPGAINFASGEIVMNEGREAKVISIKNTGDRPIQVGSHFHLFEVNSALVFFDEKGNEDKERKVAYGRRFDIPSGTAIRFEPGDKKEVSIIDLAGTREVWGVNGLVNGKLKK
Urease subunit beta E 124 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MSGSSSQFSPGKLVPGAINFASGEIVMNEGREAKVISIKNTGDRPIQVGSHFHLFEVNSALVFFDEKGNEDKERKVAYGRRFDIPSGTAIRFEPGDKKEVSIIDLAGTREVWGVNGLVNGKLKK
Urease subunit beta H 124 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MSGSSSQFSPGKLVPGAINFASGEIVMNEGREAKVISIKNTGDRPIQVGSHFHLFEVNSALVFFDEKGNEDKERKVAYGRRFDIPSGTAIRFEPGDKKEVSIIDLAGTREVWGVNGLVNGKLKK
Urease subunit alpha C 598 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MFKISRKNYSDLYGITTGDSVRLGDTNLWVKVEKDLTTYGEESVFGGGKTLREGMGMNSTMKLDDKLGNAEVMDLVITNALIVDYTGIYKADIGIKNGKIAAIGKSGNPHLTDNVDMIVGISTEISAGEGKIYTAGGLDTHVHWLEPEIVPVALDGGITTVIAGGTGMNDGTKATTVSPGKFWVKSALQAADGLSINAGFLAKGQGMEDPIFEQIAAGACGLKIHEDWGATGNAIDLALTVADKTDVAVAIHTDTLNEAGFVEHTIAAMKGRTIHAYHTEGAGGGHAPDILETVKYAHILPASTNPTIPYTVNTIAEHLDMLMVCHHLNPKVPEDVAFADSRIRSQTIAAEDLLHDMGAISIMSSDTLAMGRIGEVATRTWQMAHKMKAQFGSLKGDSEFSDNNRVKRYISKYTINPAIAHGVDSYIGSLEVGKLADIVAWEPKFFGAKPYYVVKMGVIARCVAGDPNASIPTCEPVIMRDQFGTYGRLLTNTSVSFVSKIGLENGIKEEYKLEKELLPVKNCRSVNKKSMKWNSATPNLEVDPQTFDAAVDFNDLENWLEQSASELAKKLKKTSSGKYILDAEPLTEAPLAQRYFLF
Urease subunit alpha F 598 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MFKISRKNYSDLYGITTGDSVRLGDTNLWVKVEKDLTTYGEESVFGGGKTLREGMGMNSTMKLDDKLGNAEVMDLVITNALIVDYTGIYKADIGIKNGKIAAIGKSGNPHLTDNVDMIVGISTEISAGEGKIYTAGGLDTHVHWLEPEIVPVALDGGITTVIAGGTGMNDGTKATTVSPGKFWVKSALQAADGLSINAGFLAKGQGMEDPIFEQIAAGACGLKIHEDWGATGNAIDLALTVADKTDVAVAIHTDTLNEAGFVEHTIAAMKGRTIHAYHTEGAGGGHAPDILETVKYAHILPASTNPTIPYTVNTIAEHLDMLMVCHHLNPKVPEDVAFADSRIRSQTIAAEDLLHDMGAISIMSSDTLAMGRIGEVATRTWQMAHKMKAQFGSLKGDSEFSDNNRVKRYISKYTINPAIAHGVDSYIGSLEVGKLADIVAWEPKFFGAKPYYVVKMGVIARCVAGDPNASIPTCEPVIMRDQFGTYGRLLTNTSVSFVSKIGLENGIKEEYKLEKELLPVKNCRSVNKKSMKWNSATPNLEVDPQTFDAAVDFNDLENWLEQSASELAKKLKKTSSGKYILDAEPLTEAPLAQRYFLF
Urease subunit alpha I 598 Tsukamurella Paurometabola (Strain Atcc 8368 / Dsm 20162 / Jcm 10117 / Nbrc 16120 / Nctc 13040) MFKISRKNYSDLYGITTGDSVRLGDTNLWVKVEKDLTTYGEESVFGGGKTLREGMGMNSTMKLDDKLGNAEVMDLVITNALIVDYTGIYKADIGIKNGKIAAIGKSGNPHLTDNVDMIVGISTEISAGEGKIYTAGGLDTHVHWLEPEIVPVALDGGITTVIAGGTGMNDGTKATTVSPGKFWVKSALQAADGLSINAGFLAKGQGMEDPIFEQIAAGACGLKIHEDWGATGNAIDLALTVADKTDVAVAIHTDTLNEAGFVEHTIAAMKGRTIHAYHTEGAGGGHAPDILETVKYAHILPASTNPTIPYTVNTIAEHLDMLMVCHHLNPKVPEDVAFADSRIRSQTIAAEDLLHDMGAISIMSSDTLAMGRIGEVATRTWQMAHKMKAQFGSLKGDSEFSDNNRVKRYISKYTINPAIAHGVDSYIGSLEVGKLADIVAWEPKFFGAKPYYVVKMGVIARCVAGDPNASIPTCEPVIMRDQFGTYGRLLTNTSVSFVSKIGLENGIKEEYKLEKELLPVKNCRSVNKKSMKWNSATPNLEVDPQTFDAAVDFNDLENWLEQSASELAKKLKKTSSGKYILDAEPLTEAPLAQRYFLF
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-19
Deposition Author(s): Fujita, J. , Namba, K. , Wu, H.N. , Yanagihara, I.