9IOA
Cryo-em structure of the tetrameric drt9-ncrna complex
PDB DOI: 10.2210/pdb9ioa/pdb
Classification: ANTIVIRAL PROTEIN/RNA Organism(s): Escherichia Coli
Deposited: 2024-07-08 Deposition Author(s): Jia, N. , Song, X.Y. , Wei, X.Y. , Zhang, J.T.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.59 Å
Cryo-em structure of the tetrameric drt9-ncrna complex
Jia, N. , Song, X.Y. , Wei, X.Y. , Zhang, J.T.
Primary Citation of Related Structures: 9IOA
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA (177-MER) | d | 177 | NA | AUUCUCUCAUAGGGAUAACGGUGUGGCCUUCUACCUGUUAGAAAUAAUGGGUCUUCAGUUGUAAUUCGUUGCAACUGACGGGGGGGUGGUGUCAAAGCCGUUUCAACCAAGUGGUAACUUACUUUUACUUGGGUUUAUACCGUGGAAAAGCCUGAGUCUAACUCAGGCUUUUUUGUU |
| RNA (177-MER) | f | 177 | NA | AUUCUCUCAUAGGGAUAACGGUGUGGCCUUCUACCUGUUAGAAAUAAUGGGUCUUCAGUUGUAAUUCGUUGCAACUGACGGGGGGGUGGUGUCAAAGCCGUUUCAACCAAGUGGUAACUUACUUUUACUUGGGUUUAUACCGUGGAAAAGCCUGAGUCUAACUCAGGCUUUUUUGUU |
| RNA (177-MER) | h | 177 | NA | AUUCUCUCAUAGGGAUAACGGUGUGGCCUUCUACCUGUUAGAAAUAAUGGGUCUUCAGUUGUAAUUCGUUGCAACUGACGGGGGGGUGGUGUCAAAGCCGUUUCAACCAAGUGGUAACUUACUUUUACUUGGGUUUAUACCGUGGAAAAGCCUGAGUCUAACUCAGGCUUUUUUGUU |
| RNA (177-MER) | b | 177 | NA | AUUCUCUCAUAGGGAUAACGGUGUGGCCUUCUACCUGUUAGAAAUAAUGGGUCUUCAGUUGUAAUUCGUUGCAACUGACGGGGGGGUGGUGUCAAAGCCGUUUCAACCAAGUGGUAACUUACUUUUACUUGGGUUUAUACCGUGGAAAAGCCUGAGUCUAACUCAGGCUUUUUUGUU |
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| RNA-dependent DNA polymerase | A | 499 | Escherichia Coli | MKLEQQIQRVILEEAKALIKDYHEYHNRVHLESVRNKKRLGDSAPDKKIHRPNYWSFDKKFDPFYVKSNYKSIARSIANKIENRTYLPNEPFTKDVPKPDGGIRKVSIYQIPDAAISKLFFNRLLAKNRHRFSSFSYAYRNDRNVHFAIQDISVDLKKNERTFLAEFDFSDFFGSISHSFLNEQFNENGFYISPEEKFIIRSFLRERKVGIPQGTSISLFLANLTCWKLDQDLEREGVKFSRYADDTIIWSQEYSKICNAFNIITNFSKSAGIKINPKKSEGISLLTKKGLPSEITSKNNLDFLGYTLSVENVSIKEKSVKKIKKQISYILYRNLIQPLKKTSLAGQTIPANDRDKNFLIAICEIRRYMYGGLSKSQIKDYLSGRSNRLYFKGIMSFYPLVNDVEQLKQLDGWIVSVIYRALKLRCQLLSKWGYNRSHNFPFILDREDIVDKCSKKTIAGRKLFEIPSFLLIHKALQKGLQESGIEKIMNPQSLNYDYE |
| RNA-dependent DNA polymerase | C | 499 | Escherichia Coli | MKLEQQIQRVILEEAKALIKDYHEYHNRVHLESVRNKKRLGDSAPDKKIHRPNYWSFDKKFDPFYVKSNYKSIARSIANKIENRTYLPNEPFTKDVPKPDGGIRKVSIYQIPDAAISKLFFNRLLAKNRHRFSSFSYAYRNDRNVHFAIQDISVDLKKNERTFLAEFDFSDFFGSISHSFLNEQFNENGFYISPEEKFIIRSFLRERKVGIPQGTSISLFLANLTCWKLDQDLEREGVKFSRYADDTIIWSQEYSKICNAFNIITNFSKSAGIKINPKKSEGISLLTKKGLPSEITSKNNLDFLGYTLSVENVSIKEKSVKKIKKQISYILYRNLIQPLKKTSLAGQTIPANDRDKNFLIAICEIRRYMYGGLSKSQIKDYLSGRSNRLYFKGIMSFYPLVNDVEQLKQLDGWIVSVIYRALKLRCQLLSKWGYNRSHNFPFILDREDIVDKCSKKTIAGRKLFEIPSFLLIHKALQKGLQESGIEKIMNPQSLNYDYE |
| RNA-dependent DNA polymerase | E | 499 | Escherichia Coli | MKLEQQIQRVILEEAKALIKDYHEYHNRVHLESVRNKKRLGDSAPDKKIHRPNYWSFDKKFDPFYVKSNYKSIARSIANKIENRTYLPNEPFTKDVPKPDGGIRKVSIYQIPDAAISKLFFNRLLAKNRHRFSSFSYAYRNDRNVHFAIQDISVDLKKNERTFLAEFDFSDFFGSISHSFLNEQFNENGFYISPEEKFIIRSFLRERKVGIPQGTSISLFLANLTCWKLDQDLEREGVKFSRYADDTIIWSQEYSKICNAFNIITNFSKSAGIKINPKKSEGISLLTKKGLPSEITSKNNLDFLGYTLSVENVSIKEKSVKKIKKQISYILYRNLIQPLKKTSLAGQTIPANDRDKNFLIAICEIRRYMYGGLSKSQIKDYLSGRSNRLYFKGIMSFYPLVNDVEQLKQLDGWIVSVIYRALKLRCQLLSKWGYNRSHNFPFILDREDIVDKCSKKTIAGRKLFEIPSFLLIHKALQKGLQESGIEKIMNPQSLNYDYE |
| RNA-dependent DNA polymerase | G | 499 | Escherichia Coli | MKLEQQIQRVILEEAKALIKDYHEYHNRVHLESVRNKKRLGDSAPDKKIHRPNYWSFDKKFDPFYVKSNYKSIARSIANKIENRTYLPNEPFTKDVPKPDGGIRKVSIYQIPDAAISKLFFNRLLAKNRHRFSSFSYAYRNDRNVHFAIQDISVDLKKNERTFLAEFDFSDFFGSISHSFLNEQFNENGFYISPEEKFIIRSFLRERKVGIPQGTSISLFLANLTCWKLDQDLEREGVKFSRYADDTIIWSQEYSKICNAFNIITNFSKSAGIKINPKKSEGISLLTKKGLPSEITSKNNLDFLGYTLSVENVSIKEKSVKKIKKQISYILYRNLIQPLKKTSLAGQTIPANDRDKNFLIAICEIRRYMYGGLSKSQIKDYLSGRSNRLYFKGIMSFYPLVNDVEQLKQLDGWIVSVIYRALKLRCQLLSKWGYNRSHNFPFILDREDIVDKCSKKTIAGRKLFEIPSFLLIHKALQKGLQESGIEKIMNPQSLNYDYE |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-07-08 Deposition Author(s): Jia, N. , Song, X.Y. , Wei, X.Y. , Zhang, J.T.