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9IAL

Structure of cyclodipeptide synthase from nocardia brasiliensis (nbra-cdps) in complex with rna microhelices mimicking trna-glu acceptor arm

PDB DOI: 10.2210/pdb9ial/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Nocardia Brasiliensis Atcc 700358 , Synthetic Construct

Deposited: 2025-02-11
Deposition Author(s): Charbonnier, J.B. , Fernandez Varela, P. , Marouf, F.Z.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.43 Å

9ial
Literature

Structure of cyclodipeptide synthase from nocardia brasiliensis (nbra-cdps) in complex with rna microhelices mimicking trna-glu acceptor arm

Charbonnier, J.B. , Fernandez Varela, P. , Marouf, F.Z.

Primary Citation of Related Structures: 9IAL


Proteins
Molecule Chains Sequence Length Organism Sequence
Cyclodipeptide synthase A 248 Nocardia Brasiliensis Atcc 700358 , Synthetic Construct MATTTTLLSASHKAAYDLRSDGITTDGRSTVLLVSVGADYHEGEKLAATIDLINRSNFGRVSIAVADTLQRHNLSGGTDIDRHARARIAGDEWIARNSTLLDRIDCPTNVLRWDFALSHPRYGDLYDAVEHAYETDEPYRHAIDSTIDRFIERRLSREPDVDQESVRKACRAYLLEECPIIMPLWAHEGFDFVIYPQRISAAMGRTRELFVVPEHPDRVAWLPLRFKKRKSALHGAREEQRSHHHHHH
Cyclodipeptide synthase B 248 Nocardia Brasiliensis Atcc 700358 , Synthetic Construct MATTTTLLSASHKAAYDLRSDGITTDGRSTVLLVSVGADYHEGEKLAATIDLINRSNFGRVSIAVADTLQRHNLSGGTDIDRHARARIAGDEWIARNSTLLDRIDCPTNVLRWDFALSHPRYGDLYDAVEHAYETDEPYRHAIDSTIDRFIERRLSREPDVDQESVRKACRAYLLEECPIIMPLWAHEGFDFVIYPQRISAAMGRTRELFVVPEHPDRVAWLPLRFKKRKSALHGAREEQRSHHHHHH
Cyclodipeptide synthase C 248 Nocardia Brasiliensis Atcc 700358 , Synthetic Construct MATTTTLLSASHKAAYDLRSDGITTDGRSTVLLVSVGADYHEGEKLAATIDLINRSNFGRVSIAVADTLQRHNLSGGTDIDRHARARIAGDEWIARNSTLLDRIDCPTNVLRWDFALSHPRYGDLYDAVEHAYETDEPYRHAIDSTIDRFIERRLSREPDVDQESVRKACRAYLLEECPIIMPLWAHEGFDFVIYPQRISAAMGRTRELFVVPEHPDRVAWLPLRFKKRKSALHGAREEQRSHHHHHH
Cyclodipeptide synthase D 248 Nocardia Brasiliensis Atcc 700358 , Synthetic Construct MATTTTLLSASHKAAYDLRSDGITTDGRSTVLLVSVGADYHEGEKLAATIDLINRSNFGRVSIAVADTLQRHNLSGGTDIDRHARARIAGDEWIARNSTLLDRIDCPTNVLRWDFALSHPRYGDLYDAVEHAYETDEPYRHAIDSTIDRFIERRLSREPDVDQESVRKACRAYLLEECPIIMPLWAHEGFDFVIYPQRISAAMGRTRELFVVPEHPDRVAWLPLRFKKRKSALHGAREEQRSHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*UP*CP*CP*CP*CP*UP*UP*UP*CP*GP*AP*GP*GP*GP*GP*AP*CP*GP*CP*CP*A)-3') o 22 NA GUCCCCUUUCGAGGGGACGCCA
RNA (5'-R(P*GP*UP*CP*CP*CP*CP*UP*UP*UP*CP*GP*AP*GP*GP*GP*GP*AP*CP*GP*CP*CP*A)-3') p 22 NA GUCCCCUUUCGAGGGGACGCCA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2025-02-11
Deposition Author(s): Charbonnier, J.B. , Fernandez Varela, P. , Marouf, F.Z.