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9I86

Enterobacteriaphage prd1 - p12 protein filament in complex with poly(dt) ssdna

PDB DOI: 10.2210/pdb9i86/pdb

Classification: REPLICATION
Organism(s): Ochrobactrum Sp. , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2025-02-04
Deposition Author(s): Degen, M. , Hiller, S. , Traeger, K.L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.75 Å

9i86
Literature

Enterobacteriaphage prd1 - p12 protein filament in complex with poly(dt) ssdna

Degen, M. , Hiller, S. , Traeger, K.L.

Primary Citation of Related Structures: 9I86


Proteins
Molecule Chains Sequence Length Organism Sequence
Single-stranded DNA-binding protein A 160 Ochrobactrum Sp. , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEIVSKLTLKTIGAQPKPHSVKENTALASIYGRVRGKKVGQSTFGDFIKFEGEFEGVNIATGEVFRSGALILPKVLESLLAGAVDGENTVDFAVEIWAKPSEKGNTGYEYGVKPLIEPAASDELAALRNQVKAALPAPAAAGEAAAEAKPAAKAKAKAEA
Single-stranded DNA-binding protein B 160 Ochrobactrum Sp. , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEIVSKLTLKTIGAQPKPHSVKENTALASIYGRVRGKKVGQSTFGDFIKFEGEFEGVNIATGEVFRSGALILPKVLESLLAGAVDGENTVDFAVEIWAKPSEKGNTGYEYGVKPLIEPAASDELAALRNQVKAALPAPAAAGEAAAEAKPAAKAKAKAEA
Single-stranded DNA-binding protein C 160 Ochrobactrum Sp. , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEIVSKLTLKTIGAQPKPHSVKENTALASIYGRVRGKKVGQSTFGDFIKFEGEFEGVNIATGEVFRSGALILPKVLESLLAGAVDGENTVDFAVEIWAKPSEKGNTGYEYGVKPLIEPAASDELAALRNQVKAALPAPAAAGEAAAEAKPAAKAKAKAEA
Single-stranded DNA-binding protein D 160 Ochrobactrum Sp. , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEIVSKLTLKTIGAQPKPHSVKENTALASIYGRVRGKKVGQSTFGDFIKFEGEFEGVNIATGEVFRSGALILPKVLESLLAGAVDGENTVDFAVEIWAKPSEKGNTGYEYGVKPLIEPAASDELAALRNQVKAALPAPAAAGEAAAEAKPAAKAKAKAEA
Single-stranded DNA-binding protein E 160 Ochrobactrum Sp. , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEIVSKLTLKTIGAQPKPHSVKENTALASIYGRVRGKKVGQSTFGDFIKFEGEFEGVNIATGEVFRSGALILPKVLESLLAGAVDGENTVDFAVEIWAKPSEKGNTGYEYGVKPLIEPAASDELAALRNQVKAALPAPAAAGEAAAEAKPAAKAKAKAEA
Single-stranded DNA-binding protein F 160 Ochrobactrum Sp. , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MEIVSKLTLKTIGAQPKPHSVKENTALASIYGRVRGKKVGQSTFGDFIKFEGEFEGVNIATGEVFRSGALILPKVLESLLAGAVDGENTVDFAVEIWAKPSEKGNTGYEYGVKPLIEPAASDELAALRNQVKAALPAPAAAGEAAAEAKPAAKAKAKAEA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
ssDNA poly(dT), 80mer y 80 NA TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
ssDNA poly(dT), 80mer z 80 NA TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2025-02-04
Deposition Author(s): Degen, M. , Hiller, S. , Traeger, K.L.