PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9HBY

Tilv-np hexamer (pseudo-c6) (local refinement around 3 tilv-nps)

PDB DOI: 10.2210/pdb9hby/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Tilapia Lake Virus , Synthetic Construct

Deposited: 2024-11-08
Deposition Author(s): Arragain, B. , Cusack, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

9hby
Literature

Tilv-np hexamer (pseudo-c6) (local refinement around 3 tilv-nps)

Arragain, B. , Cusack, S.

Primary Citation of Related Structures: 9HBY


Proteins
Molecule Chains Sequence Length Organism Sequence
Tilapia Lake Virus nucleoprotein (segment 4) A 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR
Tilapia Lake Virus nucleoprotein (segment 4) C 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR
Tilapia Lake Virus nucleoprotein (segment 4) D 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR
Tilapia Lake Virus nucleoprotein (segment 4) E 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
40-mer vRNA loop m 52 NA AXAAAAAXXAAXGCAAAUCUUUCUCACGUCCUGACUUGUGAGUAAAAUUUGG
40-mer vRNA loop n 52 NA AXAAAAAXXAAXGCAAAUCUUUCUCACGUCCUGACUUGUGAGUAAAAUUUGG
40-mer vRNA loop o 52 NA AXAAAAAXXAAXGCAAAUCUUUCUCACGUCCUGACUUGUGAGUAAAAUUUGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-11-08
Deposition Author(s): Arragain, B. , Cusack, S.