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FASTA Sequence PDB Format mmCIF Format
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9HBT

Tilv-np pentamer (pseudo-c5)

PDB DOI: 10.2210/pdb9hbt/pdb

Classification: RNA BINDING PROTEIN
Organism(s): Tilapia Lake Virus , Synthetic Construct

Deposited: 2024-11-08
Deposition Author(s): Arragain, B. , Cusack, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.46 Å

9hbt
Literature

Tilv-np pentamer (pseudo-c5)

Arragain, B. , Cusack, S.

Primary Citation of Related Structures: 9HBT


Proteins
Molecule Chains Sequence Length Organism Sequence
Tilapia Lake Virus nucleoprotein (segment 4) A 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR
Tilapia Lake Virus nucleoprotein (segment 4) B 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR
Tilapia Lake Virus nucleoprotein (segment 4) C 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR
Tilapia Lake Virus nucleoprotein (segment 4) D 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR
Tilapia Lake Virus nucleoprotein (segment 4) E 354 Tilapia Lake Virus , Synthetic Construct MVRTTKTSMAAASTVAPEVAMDEGSPSTSQAQVELPRNLEVFNEACGHVFGSSFNREDNSVISDAAAFLFKMHTHSLDGQEAKVLRASEKKRERENAKKSRKAPEAGMRVGRSLILTSRWTEYCATCVPALGSKMKVIKASGDAAMIQMMKDHNSLLRVCVRIEVWKARYVSLVALDERIQTLEDAQWFPYLSGDSYRACPGLVGGYFAKKAAAGERGKNYKKLNQTAIIPPPRFLIIGHRLQIGDQVTLRELLASIAWGLCDGVLAECWSPSQGDGSIGVVVGLPLQATGSCFLVVASHGLSAIADSRIEGTGNTNLLEECIAIQKQDGVIKCKRSGKSLYHCLKETAGAVGR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
40-mer vRNA loop o 52 NA AXAAAAAXXXAXGCAAAUCUUUCUCACGUCCUGACUUGUGAGUAAAAUUUGG
40-mer vRNA loop p 52 NA AXAAAAAXXXAXGCAAAUCUUUCUCACGUCCUGACUUGUGAGUAAAAUUUGG
40-mer vRNA loop q 52 NA AXAAAAAXXXAXGCAAAUCUUUCUCACGUCCUGACUUGUGAGUAAAAUUUGG
40-mer vRNA loop r 52 NA AXAAAAAXXXAXGCAAAUCUUUCUCACGUCCUGACUUGUGAGUAAAAUUUGG
40-mer vRNA loop s 52 NA AXAAAAAXXXAXGCAAAUCUUUCUCACGUCCUGACUUGUGAGUAAAAUUUGG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-11-08
Deposition Author(s): Arragain, B. , Cusack, S.