9H6T
Partial cas1-cas2 crispr integrase complex bound to a half-integration product, streptococcus thermophilus dgcc 7710 crispr3 system
PDB DOI: 10.2210/pdb9h6t/pdb
Classification: DNA BINDING PROTEIN Organism(s): Streptococcus Thermophilus Dgcc 7710 , Synthetic Construct
Deposited: 2024-10-25 Deposition Author(s): Gaizauskaite, U. , Sasnauskas, G. , Tamulaitiene, G.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.93 Å
Partial cas1-cas2 crispr integrase complex bound to a half-integration product, streptococcus thermophilus dgcc 7710 crispr3 system
Gaizauskaite, U. , Sasnauskas, G. , Tamulaitiene, G.
Primary Citation of Related Structures: 9H6T
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR-associated endoribonuclease Cas2 | A | 114 | Streptococcus Thermophilus Dgcc 7710 , Synthetic Construct | MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNHTANTAMVGRLKANNPKKGNITILTVTEKQFARMIYLYGDKNTSIANSEERLVFLGDNYCDED |
| CRISPR-associated endoribonuclease Cas2 | D | 114 | Streptococcus Thermophilus Dgcc 7710 , Synthetic Construct | MSYRYMRMILMFDMPTDTAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNHTANTAMVGRLKANNPKKGNITILTVTEKQFARMIYLYGDKNTSIANSEERLVFLGDNYCDED |
| CRISPR-associated endonuclease Cas1 | B | 289 | Streptococcus Thermophilus Dgcc 7710 , Synthetic Construct | MAGWRTVVVNIHSKLSYKNNHLIFRNSYKTEMIHLSEIDILLLETTDIVLTTMLVKRLVDENILVIFCDDKRLPTAFLTPYYARHDSSLQIARQIAWKENVKCEVWTAIIAQKILNQSYYLGECSFFEKSQSIMELYHGLERFDPSNREGHSARIYFNTLFGNDFTRESDNDINAALDYGYTLLLSMFAREVVVCGCMTQIGLKHANQFNQFNLASDIMEPFRPIIDRIVYQNRHNNFVKIKKELFSIFSETYLYNGKEMYLSNIVSDYTKKVIKALNQLGEEIPEFRI |
| CRISPR-associated endonuclease Cas1 | C | 289 | Streptococcus Thermophilus Dgcc 7710 , Synthetic Construct | MAGWRTVVVNIHSKLSYKNNHLIFRNSYKTEMIHLSEIDILLLETTDIVLTTMLVKRLVDENILVIFCDDKRLPTAFLTPYYARHDSSLQIARQIAWKENVKCEVWTAIIAQKILNQSYYLGECSFFEKSQSIMELYHGLERFDPSNREGHSARIYFNTLFGNDFTRESDNDINAALDYGYTLLLSMFAREVVVCGCMTQIGLKHANQFNQFNLASDIMEPFRPIIDRIVYQNRHNNFVKIKKELFSIFSETYLYNGKEMYLSNIVSDYTKKVIKALNQLGEEIPEFRI |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Fragment of Leader DNA adjacent to the integration site | e | 6 | NA | TACGAG |
| Integration target DNA, the intact strand | f | 48 | NA | TACGAGGTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAACCTCGTA |
| Integration product | g | 75 | NA | ACAACAGCGTAGCTGAGGCCTCAGCTACGAACCGTTTTGGAACCATTCGAAACAACACAGCTCTAAAACCTCGTA |
| DNA prespacer, the non-integrated strand | h | 33 | NA | ACAACAGCGTAGCTGAGGCCTCAGCTACGAACC |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-10-25 Deposition Author(s): Gaizauskaite, U. , Sasnauskas, G. , Tamulaitiene, G.