Cryo em structure of rc-dlh complex model ii from gemmatimonas groenlandica
PDB DOI: 10.2210/pdb9h22/pdb
Classification: PHOTOSYNTHESIS Organism(s): Gemmatimonas Groenlandica
Deposited: 2024-10-10 Deposition Author(s): Bina, D. , Castro-Hartmann, P. , Gardian, Z. , Gardiner, A.T. , Jakobi, A. , Jing, Y. , Joosten, M. , Kaftan, D. , Koblizek, M. , Mujakic, I. , Qian, P.
Method: ELECTRON MICROSCOPY Resolution: 2.3 Å
Cryo em structure of rc-dlh complex model ii from gemmatimonas groenlandica
Bina, D. , Castro-Hartmann, P. , Gardian, Z. , Gardiner, A.T. , Jakobi, A. , Jing, Y. , Joosten, M. , Kaftan, D. , Koblizek, M. , Mujakic, I. , Qian, P.
Primary Citation of Related Structures: 9H22
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| reaction centre S sub unit | S | 204 | Gemmatimonas Groenlandica | MMLRQDRPRVLSRVSTVVGIGALVAVAMAARSQGGQQATPPSAPQPPVAAPSAAPAATDSTMQDSTQRADTTAKADSMLAMPDSMMMQHTAAAPAPQASAMWPVDPVTGQTIINGEPVVGRVFIMQKTDGTVKLGKWQAQYDGEPTAPEAANVGSSYTVPAPEHTRRMRGIMIQSTLWSIDGKRSARERRHYRPQTTGAALGQQ |
| Reaction center protein L chain | L | 274 | Gemmatimonas Groenlandica | MAMLSFEKKYRVRGGTLIGGDLFDFWFGPFYVGFFGVTTIFFVTLGTLLCVWGAAMGPTWNLWQISIAPPDLKYGLGLAPLREGGLWQIITLCALGAFGSWALRQAEISRKLGMGMHIPWAYGGAVLAYATLVVIRPMLLGAWGHGFPYGIFSHLDWVSNVGYQYLHFHYNPAHMIAVTFFFTNCLALAMHGSLILSVTNPKKGTPVGTSETENVFFRDLLGYSIGAIGIHRLGLFLAVGAAVWSAICIVISGPFWTKGWPEWWNWWLNLPIWR |
| Reaction center protein M chain | M | 392 | Gemmatimonas Groenlandica | MLEYQNLFTRVQVRTVPEAGIEIDESTGTRYGTGTFSYLAGKFGDAQIGPIYLGWAGVLSLIFGFMAFEIIGLNMWASVGWDPVEFIRQLPWLALEPPPPQYGLRVPPLAQGGWYLMAGFFLTISILLWWVRVYRRARALNMGTHLPWAFASAIFLYSTFFFQPLLVGSWSEMVPFGIFPHLDWTSAFSIRYGNLYYNPFHALSIAFLYGSAVLFAMHGATILAVARLGGEREIEQITDRGTAAERSMLFWRWTMGFNATMESIHRWSWWFAVLTTFSGGIGILLTGTVVDNWYLWGVKHGLVAPYPAQNTLTEEQQQLLRGRYQGTAPDSFPSYVAPQPAMMLDSTAMMAPADSMKADSTKVDSAAAPSAPAAAAPPPAKPPAPSVGGKTP |
| reaction centre Ht su unit | H | 66 | Gemmatimonas Groenlandica | MQYIDGAQIALYAFWLFFFGLIIYIRREDKREGYPLESPQGPREGWPAMPEKKTYIHRPTSGEGTH |
| reaction centre Hc sub unit | K | 180 | Gemmatimonas Groenlandica | MSDIKAVPADSYNGSALIPTGDPMIDGVGPSSWANRSDTPDMTFHNTAKIVPMRLDPTYSIAKGDPDPRGLPVVAADKQVAGTVIELWVNRAEPQVTYYEVQLTGSERRVMLPAGFVQWPNFGLWGNDKLLVKAITAAQFANVPALKRDDQITLLEEDMVCAYYAGGHLYAMAERSEPII |
| Photosynthetic reaction center cytochrome c subunit | C | 373 | Gemmatimonas Groenlandica | MSILRRSIGLVAPLALLSLGACGDTATDSVQVGYRGTGMEQNYDHGDLKKQFAQVKIPTPLPPAGESPPGPLPWQNVQVLNDISVGEFNRTMVAMSTWVAGTGNCAYCHNIANLAADTLPNGKPLYTKLVARRMLQMTRQINGQYSQHVKNTGVTCYTCHMGKPLPNGLWFYSSQTDYLRHYLDRDGARVVTRDVAPSNANRSSVKQTEWTYALMISQSRSLGVNCTYCHNTRQFASWKEAPPARVTAYHGILMLRDVNQNYLSPLQPVYPSVRLGTQGDAPKAQCVTCHNGNYKPLYGAQMVKDYPALWGRADWNGVPFQGLSPKADTTSAGAAPAAPAAAAPVPAVKRSSARTVPAPTVIGGAVGSPNTPK |
| Light-harvesting protein | AA | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AB | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AC | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AD | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AE | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AF | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AG | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AH | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AI | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AJ | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AK | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AL | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AM | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AN | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AO | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AP | 71 | Gemmatimonas Groenlandica | MHRIWLMFDPRRVMVAMVGFLAVLALVIHFILLSSQRYSWIENGTLSAAQAPVGASAPAAAAEMSPLPPGR |
| Light-harvesting protein | AQ | 56 | Gemmatimonas Groenlandica | MHRIWQGMDPQIIMSGLGFFLAGLALIIHMWAYSITGWPKYKKAQYNAQTPPTAVR |
| Light-harvesting protein | AR | 56 | Gemmatimonas Groenlandica | MHRIWQGMDPQIIMSGLGFFLAGLALIIHMWAYSITGWPKYKKAQYNAQTPPTAVR |
| Light-harvesting protein | AS | 56 | Gemmatimonas Groenlandica | MHRIWQGMDPQIIMSGLGFFLAGLALIIHMWAYSITGWPKYKKAQYNAQTPPTAVR |
| Light-harvesting protein | AT | 56 | Gemmatimonas Groenlandica | MHRIWQGMDPQIIMSGLGFFLAGLALIIHMWAYSITGWPKYKKAQYNAQTPPTAVR |
| Light-harvesting protein | AU | 56 | Gemmatimonas Groenlandica | MHRIWQGMDPQIIMSGLGFFLAGLALIIHMWAYSITGWPKYKKAQYNAQTPPTAVR |
| Light-harvesting protein | AV | 56 | Gemmatimonas Groenlandica | MHRIWQGMDPQIIMSGLGFFLAGLALIIHMWAYSITGWPKYKKAQYNAQTPPTAVR |
| Light-harvesting protein | AW | 56 | Gemmatimonas Groenlandica | MHRIWQGMDPQIIMSGLGFFLAGLALIIHMWAYSITGWPKYKKAQYNAQTPPTAVR |
| Light-harvesting protein | AX | 56 | Gemmatimonas Groenlandica | MHRIWQGMDPQIIMSGLGFFLAGLALIIHMWAYSITGWPKYKKAQYNAQTPPTAVR |
| Light-harvesting protein | BA | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BB | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BC | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BD | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BE | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BF | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BG | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BH | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BI | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BJ | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BK | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BL | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BM | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BN | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BO | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BP | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BQ | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BR | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BS | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BT | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BU | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BV | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BW | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
| Light-harvesting protein | BX | 44 | Gemmatimonas Groenlandica | MMEKGGMTEDEARRFHGYFVTGTLGYIIVAAVAHFLAWQWRPWF |
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-10-10 Deposition Author(s): Bina, D. , Castro-Hartmann, P. , Gardian, Z. , Gardiner, A.T. , Jakobi, A. , Jing, Y. , Joosten, M. , Kaftan, D. , Koblizek, M. , Mujakic, I. , Qian, P.