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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9GS0

Capsid of full haloferax tailed virus 1 without turret head protein gp31.

PDB DOI: 10.2210/pdb9gs0/pdb

Classification: VIRUS
Organism(s): Prochlorococcus Phage P-Hm1

Deposited: 2024-09-13
Deposition Author(s): Daum, B. , Isupov, M.N. , Mclaren, M. , Stuart, W. , Zhang, D.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.37 Å

9gs0
Literature

Capsid of full haloferax tailed virus 1 without turret head protein gp31.

Daum, B. , Isupov, M.N. , Mclaren, M. , Stuart, W. , Zhang, D.

Primary Citation of Related Structures: 9GS0


Proteins
Molecule Chains Sequence Length Organism Sequence
HK97 gp5-like major capsid protein AA 396 Prochlorococcus Phage P-Hm1 MLMEAALPGSDVSAREVAKVWPGAKKGDYSFLQGNQSRSLEAEMTRTARAEAGTDRHRALKDYAVDADNLPKTLSAGSKHLTEDGDVIEARLDDAIPRMLFAASDPEYVDTLFREQLLEVVMEGRELRKVAREASNVINANTRVGDVPIASDEEFARPTGQGAEIRDDGETYTTVAWNATKLTEGSRVTDEMRDQAMVDLIERNIQRVGASLENGINRVFLTELVDNAQNNHDTAGSNQGYQALNSAVGEVDKDDFRPDTYVTHPDYRTQLFNDTNLAYANRAGTNEVLRNREDAPIVGDIAGLDMHAAMSSATYDDGTDIGWSGGSETWGFSSDGDKGAVVYDRDNIHTILYAPNGQDVEIKDYEDPIRDITGVNGRLHVDCQYSQGRSSATVQY
HK97 gp5-like major capsid protein AB 396 Prochlorococcus Phage P-Hm1 MLMEAALPGSDVSAREVAKVWPGAKKGDYSFLQGNQSRSLEAEMTRTARAEAGTDRHRALKDYAVDADNLPKTLSAGSKHLTEDGDVIEARLDDAIPRMLFAASDPEYVDTLFREQLLEVVMEGRELRKVAREASNVINANTRVGDVPIASDEEFARPTGQGAEIRDDGETYTTVAWNATKLTEGSRVTDEMRDQAMVDLIERNIQRVGASLENGINRVFLTELVDNAQNNHDTAGSNQGYQALNSAVGEVDKDDFRPDTYVTHPDYRTQLFNDTNLAYANRAGTNEVLRNREDAPIVGDIAGLDMHAAMSSATYDDGTDIGWSGGSETWGFSSDGDKGAVVYDRDNIHTILYAPNGQDVEIKDYEDPIRDITGVNGRLHVDCQYSQGRSSATVQY
HK97 gp5-like major capsid protein AC 396 Prochlorococcus Phage P-Hm1 MLMEAALPGSDVSAREVAKVWPGAKKGDYSFLQGNQSRSLEAEMTRTARAEAGTDRHRALKDYAVDADNLPKTLSAGSKHLTEDGDVIEARLDDAIPRMLFAASDPEYVDTLFREQLLEVVMEGRELRKVAREASNVINANTRVGDVPIASDEEFARPTGQGAEIRDDGETYTTVAWNATKLTEGSRVTDEMRDQAMVDLIERNIQRVGASLENGINRVFLTELVDNAQNNHDTAGSNQGYQALNSAVGEVDKDDFRPDTYVTHPDYRTQLFNDTNLAYANRAGTNEVLRNREDAPIVGDIAGLDMHAAMSSATYDDGTDIGWSGGSETWGFSSDGDKGAVVYDRDNIHTILYAPNGQDVEIKDYEDPIRDITGVNGRLHVDCQYSQGRSSATVQY
HK97 gp5-like major capsid protein AD 396 Prochlorococcus Phage P-Hm1 MLMEAALPGSDVSAREVAKVWPGAKKGDYSFLQGNQSRSLEAEMTRTARAEAGTDRHRALKDYAVDADNLPKTLSAGSKHLTEDGDVIEARLDDAIPRMLFAASDPEYVDTLFREQLLEVVMEGRELRKVAREASNVINANTRVGDVPIASDEEFARPTGQGAEIRDDGETYTTVAWNATKLTEGSRVTDEMRDQAMVDLIERNIQRVGASLENGINRVFLTELVDNAQNNHDTAGSNQGYQALNSAVGEVDKDDFRPDTYVTHPDYRTQLFNDTNLAYANRAGTNEVLRNREDAPIVGDIAGLDMHAAMSSATYDDGTDIGWSGGSETWGFSSDGDKGAVVYDRDNIHTILYAPNGQDVEIKDYEDPIRDITGVNGRLHVDCQYSQGRSSATVQY
HK97 gp5-like major capsid protein AE 396 Prochlorococcus Phage P-Hm1 MLMEAALPGSDVSAREVAKVWPGAKKGDYSFLQGNQSRSLEAEMTRTARAEAGTDRHRALKDYAVDADNLPKTLSAGSKHLTEDGDVIEARLDDAIPRMLFAASDPEYVDTLFREQLLEVVMEGRELRKVAREASNVINANTRVGDVPIASDEEFARPTGQGAEIRDDGETYTTVAWNATKLTEGSRVTDEMRDQAMVDLIERNIQRVGASLENGINRVFLTELVDNAQNNHDTAGSNQGYQALNSAVGEVDKDDFRPDTYVTHPDYRTQLFNDTNLAYANRAGTNEVLRNREDAPIVGDIAGLDMHAAMSSATYDDGTDIGWSGGSETWGFSSDGDKGAVVYDRDNIHTILYAPNGQDVEIKDYEDPIRDITGVNGRLHVDCQYSQGRSSATVQY
HK97 gp5-like major capsid protein AF 396 Prochlorococcus Phage P-Hm1 MLMEAALPGSDVSAREVAKVWPGAKKGDYSFLQGNQSRSLEAEMTRTARAEAGTDRHRALKDYAVDADNLPKTLSAGSKHLTEDGDVIEARLDDAIPRMLFAASDPEYVDTLFREQLLEVVMEGRELRKVAREASNVINANTRVGDVPIASDEEFARPTGQGAEIRDDGETYTTVAWNATKLTEGSRVTDEMRDQAMVDLIERNIQRVGASLENGINRVFLTELVDNAQNNHDTAGSNQGYQALNSAVGEVDKDDFRPDTYVTHPDYRTQLFNDTNLAYANRAGTNEVLRNREDAPIVGDIAGLDMHAAMSSATYDDGTDIGWSGGSETWGFSSDGDKGAVVYDRDNIHTILYAPNGQDVEIKDYEDPIRDITGVNGRLHVDCQYSQGRSSATVQY
HK97 gp5-like major capsid protein AG 396 Prochlorococcus Phage P-Hm1 MLMEAALPGSDVSAREVAKVWPGAKKGDYSFLQGNQSRSLEAEMTRTARAEAGTDRHRALKDYAVDADNLPKTLSAGSKHLTEDGDVIEARLDDAIPRMLFAASDPEYVDTLFREQLLEVVMEGRELRKVAREASNVINANTRVGDVPIASDEEFARPTGQGAEIRDDGETYTTVAWNATKLTEGSRVTDEMRDQAMVDLIERNIQRVGASLENGINRVFLTELVDNAQNNHDTAGSNQGYQALNSAVGEVDKDDFRPDTYVTHPDYRTQLFNDTNLAYANRAGTNEVLRNREDAPIVGDIAGLDMHAAMSSATYDDGTDIGWSGGSETWGFSSDGDKGAVVYDRDNIHTILYAPNGQDVEIKDYEDPIRDITGVNGRLHVDCQYSQGRSSATVQY
Capsid stabilization protein AI 137 Prochlorococcus Phage P-Hm1 MATETQGEHTFPVEVLISGEELRGYTAGEALSAGEPVYLSGDYEVSASSADGGEFLGVNLYDVASGEPVALAGDDCEVRVEVSEQVTANDEILPDGLGTFETVATSAASAGVAIVQEGAASGEVCEAYIFAVQGTTA
Capsid stabilization protein AJ 137 Prochlorococcus Phage P-Hm1 MATETQGEHTFPVEVLISGEELRGYTAGEALSAGEPVYLSGDYEVSASSADGGEFLGVNLYDVASGEPVALAGDDCEVRVEVSEQVTANDEILPDGLGTFETVATSAASAGVAIVQEGAASGEVCEAYIFAVQGTTA
Capsid stabilization protein AK 137 Prochlorococcus Phage P-Hm1 MATETQGEHTFPVEVLISGEELRGYTAGEALSAGEPVYLSGDYEVSASSADGGEFLGVNLYDVASGEPVALAGDDCEVRVEVSEQVTANDEILPDGLGTFETVATSAASAGVAIVQEGAASGEVCEAYIFAVQGTTA
Capsid stabilization protein AL 137 Prochlorococcus Phage P-Hm1 MATETQGEHTFPVEVLISGEELRGYTAGEALSAGEPVYLSGDYEVSASSADGGEFLGVNLYDVASGEPVALAGDDCEVRVEVSEQVTANDEILPDGLGTFETVATSAASAGVAIVQEGAASGEVCEAYIFAVQGTTA
Capsid stabilization protein AM 137 Prochlorococcus Phage P-Hm1 MATETQGEHTFPVEVLISGEELRGYTAGEALSAGEPVYLSGDYEVSASSADGGEFLGVNLYDVASGEPVALAGDDCEVRVEVSEQVTANDEILPDGLGTFETVATSAASAGVAIVQEGAASGEVCEAYIFAVQGTTA
Capsid stabilization protein AN 137 Prochlorococcus Phage P-Hm1 MATETQGEHTFPVEVLISGEELRGYTAGEALSAGEPVYLSGDYEVSASSADGGEFLGVNLYDVASGEPVALAGDDCEVRVEVSEQVTANDEILPDGLGTFETVATSAASAGVAIVQEGAASGEVCEAYIFAVQGTTA
Capsid stabilization protein AO 137 Prochlorococcus Phage P-Hm1 MATETQGEHTFPVEVLISGEELRGYTAGEALSAGEPVYLSGDYEVSASSADGGEFLGVNLYDVASGEPVALAGDDCEVRVEVSEQVTANDEILPDGLGTFETVATSAASAGVAIVQEGAASGEVCEAYIFAVQGTTA
Gp30 AS 115 Prochlorococcus Phage P-Hm1 MTDTIVNVQGSFFSASASGVADTESLLIDPQDAKFGAIEIHNIAHGGSVDVELLTSSDDTELVEDAAVTLDSFTGEGISQGNQIEASDNTNTYIRITNTSGGAIDIIATGREVSQ
Gp30 AT 115 Prochlorococcus Phage P-Hm1 MTDTIVNVQGSFFSASASGVADTESLLIDPQDAKFGAIEIHNIAHGGSVDVELLTSSDDTELVEDAAVTLDSFTGEGISQGNQIEASDNTNTYIRITNTSGGAIDIIATGREVSQ
Gp30 AU 115 Prochlorococcus Phage P-Hm1 MTDTIVNVQGSFFSASASGVADTESLLIDPQDAKFGAIEIHNIAHGGSVDVELLTSSDDTELVEDAAVTLDSFTGEGISQGNQIEASDNTNTYIRITNTSGGAIDIIATGREVSQ
Gp30 AV 115 Prochlorococcus Phage P-Hm1 MTDTIVNVQGSFFSASASGVADTESLLIDPQDAKFGAIEIHNIAHGGSVDVELLTSSDDTELVEDAAVTLDSFTGEGISQGNQIEASDNTNTYIRITNTSGGAIDIIATGREVSQ
Gp30 AW 115 Prochlorococcus Phage P-Hm1 MTDTIVNVQGSFFSASASGVADTESLLIDPQDAKFGAIEIHNIAHGGSVDVELLTSSDDTELVEDAAVTLDSFTGEGISQGNQIEASDNTNTYIRITNTSGGAIDIIATGREVSQ
Gp30 AX 115 Prochlorococcus Phage P-Hm1 MTDTIVNVQGSFFSASASGVADTESLLIDPQDAKFGAIEIHNIAHGGSVDVELLTSSDDTELVEDAAVTLDSFTGEGISQGNQIEASDNTNTYIRITNTSGGAIDIIATGREVSQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-09-13
Deposition Author(s): Daum, B. , Isupov, M.N. , Mclaren, M. , Stuart, W. , Zhang, D.