9GBI
Cryo-em structure of arabidopsis thaliana psi-lhci wild-type
PDB DOI: 10.2210/pdb9gbi/pdb
Classification: PHOTOSYNTHESIS Organism(s): Arabidopsis Thaliana
Deposited: 2024-07-31 Deposition Author(s): Bassi, R. , Bonnet, D.M.V. , Capaldi, S. , Chaves-Sanjuan, A.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.13 Å
Cryo-em structure of arabidopsis thaliana psi-lhci wild-type
Bassi, R. , Bonnet, D.M.V. , Capaldi, S. , Chaves-Sanjuan, A.
Primary Citation of Related Structures: 9GBI
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Chlorophyll a-b binding protein 6, chloroplastic | 1 | 206 | Arabidopsis Thaliana | AGNVGRIRMAAHWMPGEPRPAYLDGSAPGDFGFDPLGLGEVPANLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPFN |
| Photosystem I reaction center subunit III, chloroplastic | F | 154 | Arabidopsis Thaliana | DISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKTKRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAISGEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV |
| Photosystem I reaction center subunit V, chloroplastic | G | 100 | Arabidopsis Thaliana | ELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG |
| Photosystem I reaction center subunit VI-1, chloroplastic | H | 95 | Arabidopsis Thaliana | KYGDKSVYFDLEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLILGGGSLLTYVSATSTGEVLPIKRGPQEPPKLGPRGKL |
| Photosystem I reaction center subunit VIII | I | 37 | Arabidopsis Thaliana | MTTFNNLPSIFVPLVGLVFPAIAMASLFLHIQKNKIF |
| Photosystem I reaction center subunit IX | J | 44 | Arabidopsis Thaliana | MRDLKTYLSVAPVISTLWFAALAGLLIEINRLFPDALIFPFFSF |
| Photosystem I reaction center subunit XI, chloroplastic | L | 169 | Arabidopsis Thaliana | AVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK |
| Photosystem I reaction center subunit psaK, chloroplastic | K | 84 | Arabidopsis Thaliana | DFIGSSTNLIMVTSTTLMLFAGRFGLAPSANRKATAGLRLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLGLKNIGAI |
| Photosystem I reaction center subunit N, chloroplastic | N | 85 | Arabidopsis Thaliana | GVIDEYLERSKTNKELNDKKRLATSGANFARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW |
| Photosystem I chlorophyll a/b-binding protein 2, chloroplastic | 2 | 214 | Arabidopsis Thaliana | RAVAADPDRPIWFPGSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK |
| Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic | 3 | 234 | Arabidopsis Thaliana | KAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH |
| Chlorophyll a-b binding protein 4, chloroplastic | 4 | 199 | Arabidopsis Thaliana | KKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN |
| Photosystem I P700 chlorophyll a apoprotein A1 | A | 750 | Arabidopsis Thaliana | MIIRSPEPEVKILVDRDPIKTSFEEWAKPGHFSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGARFSNYEAWLSDPTHIGPSAQVVWSIVGQEILNGDVGGGFRGIQITSGFFQIWRASGITSELQLYCTAIGGLVFAALMLFAGWFHYHKAAPKLAWFQDVESMLNHHLAGLLGLGSLSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWSKYAEFLTFRGGLDPVTGGLWLTDIAHHHLAIAILFLIAGHMYRTNWGIGHGIKDILEAHKGPFTGQGHKGLYEILTTSWHAQLSINLAMLGSLTIVVAHHMYSMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPGTTAPGATTSTSLTWGGGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHFSWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQSYGSSLSAYGLFFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPATQPRALSIVQGRAVGVTHYLLGGIATTWAFFLARIIAVG |
| Photosystem I P700 chlorophyll a apoprotein A2 | B | 734 | Arabidopsis Thaliana | MALRFPRFSQGLAQDPTTRRIWFGIATAHDFENHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFEAWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLGVLPHPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGTGTAILTLLGGFHPQTQSLWLTDIAHHHLAIAILFLVAGHMYRTNFGIGHSIKDLLEAHIPPGGRLGRGHRGLYDTINNSIHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNEDNVLARMLDHKEAIISHLSWASLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTNSPAFNAGRSIWLPGWLNAINENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG |
| Photosystem I iron-sulfur center | C | 81 | Arabidopsis Thaliana | MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLAY |
| Photosystem I reaction center subunit II-2, chloroplastic | D | 160 | Arabidopsis Thaliana | EKTESSSAAPAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKITYQFYRVFPNGEVQYLHPKDGVYPEKANPGREGVGLNMRSIGKNVSPIEVKFTGKQSYDL |
| Photosystem I reaction center subunit IV B, chloroplastic | E | 99 | Arabidopsis Thaliana | AAEDTPPATASSDSSSTTAAAAPAKVPAAKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-07-31 Deposition Author(s): Bassi, R. , Bonnet, D.M.V. , Capaldi, S. , Chaves-Sanjuan, A.