PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9GB4

Contracted phicd508 portal

PDB DOI: 10.2210/pdb9gb4/pdb

Classification: VIRAL PROTEIN
Organism(s): Clostridioides Difficile

Deposited: 2024-07-29
Deposition Author(s): Bullough, P.A. , Fagan, R.P. , Wilson, J.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.88 Å

9gb4
Literature

Contracted phicd508 portal

Bullough, P.A. , Fagan, R.P. , Wilson, J.S.

Primary Citation of Related Structures: 9GB4


Proteins
Molecule Chains Sequence Length Organism Sequence
gp45 - Portal protein L 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein A 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein B 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein C 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein D 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein E 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein F 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein G 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein H 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein I 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein J 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
gp45 - Portal protein K 500 Clostridioides Difficile MGIISYVKKLFKRPAGEIMRMSSGNIGVYKLDDSRVDYELARELYQNKNANYKLGSSFVRPIVNSTTGFMGVPHFQIEDEEAQYILDEFVLDNTSKMLKTHTDSLKQGDCYIWITREERENPLYPDKKVRLIYNFISPEEVKEIILDPTTKEPIAYILESQNEWTDLGENKRKAKVKQIITAESRFVEVEGDKIEGLEEGETPNVWGFIPIIHFKNEADETLKYGQSDIEPIEPLLKAYHDVMLHALKGSKMHSTPKLKLKLTDVASFLAHNFGVEDPVKFAKEGGKINLDGHEILFLNKDEEAEFVEVKSAIGDAKELLKLLFYCIVDVSETPEFIFGVHTPSALASVKEQMPIMVNKIRRKREQFTNSWQLLARMVLIMSSNSSGMKYSSYDVTIGWDEVNPRDDKELAETLEKVCCALDKALEGGFISEESTVNFLAQYIDTMSNYISDDPEREGEREKIIKTKMLKYRLDDSQGLNDESNEIEKEINKIKDNNGNG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-29
Deposition Author(s): Bullough, P.A. , Fagan, R.P. , Wilson, J.S.