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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9GB0

Extended phicd508 portal adjacent capsid

PDB DOI: 10.2210/pdb9gb0/pdb

Classification: VIRAL PROTEIN
Organism(s): Clostridioides Difficile

Deposited: 2024-07-29
Deposition Author(s): Bullough, P.A. , Fagan, R.P. , Wilson, J.S.

Downloading... [17002/6016518]
Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.23 Å

9gb0
Literature

Extended phicd508 portal adjacent capsid

Bullough, P.A. , Fagan, R.P. , Wilson, J.S.

Primary Citation of Related Structures: 9GB0


Proteins
Molecule Chains Sequence Length Organism Sequence
gp49 - Major capsid protein A 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein B 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein E 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein F 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein I 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein J 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein M 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein N 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein Q 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein R 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp48 - Minor capsid protein C 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein D 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein G 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein H 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein K 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein L 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein O 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein P 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein S 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein T 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein U 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein V 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein W 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein X 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein Y 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-29
Deposition Author(s): Bullough, P.A. , Fagan, R.P. , Wilson, J.S.