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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9GAZ

Contracted phicd508 capsid

PDB DOI: 10.2210/pdb9gaz/pdb

Classification: VIRUS
Organism(s): Clostridioides Difficile

Deposited: 2024-07-29
Deposition Author(s): Bullough, P.A. , Fagan, R.P. , Wilson, J.S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.28 Å

9gaz
Literature

Contracted phicd508 capsid

Bullough, P.A. , Fagan, R.P. , Wilson, J.S.

Primary Citation of Related Structures: 9GAZ


Proteins
Molecule Chains Sequence Length Organism Sequence
gp49 - Major capsid protein A 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein B 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein D 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein F 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein G 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein H 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp49 - Major capsid protein K 345 Clostridioides Difficile MAFKVISQENLLEQKRKETLQEDIPFIVNGEMEYVTKKISNGEMETLELNKPLGEMMTFSSTSNLKELLRKVVLDVELGREQVQLLYKPIYDSIADSNLPQVMDAKWALQGNCVFLEHIEGEEIKFGTINAENGPVARIQTYATGFEYTKEMKDFNQTFSVEILNKSIGESYNALLNHIHLSPIINFNYKASNKTAFKGETNDPIWLGIWRTLTQAQKDTVIAKRQGNILMASSADQIEIEMALNGGHLLNGSMYPSIKNISTVIYYDGWEVTVGKKTYSYKGVTPGKGYLIRPKRGFKELIKRDLTTEVGNADLSKLVENQIVGHCYRGAFAAVEENVQEISFR
gp48 - Minor capsid protein C 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein E 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein I 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein J 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein L 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein M 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
gp48 - Minor capsid protein N 127 Clostridioides Difficile MAFKGQPTPSTITQITRAKISDGKSVRVILSEGESTKTQQFYLINGFFGVAMQDGEKGDEVTLQIEQAEYETDNIVTSEAFEAGKLIYWDNTAKKFTTTSASNRLVGRVTDGKDSNNVIWFILLPQQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-29
Deposition Author(s): Bullough, P.A. , Fagan, R.P. , Wilson, J.S.