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9G9J
Cryoem structure of enterococcus italicus csm-crrna complex bound to pnppa3 and ampnpp
PDB DOI: 10.2210/pdb9g9j/pdb
Classification: RNA BINDING PROTEIN Organism(s): Enterococcus Italicus Dsm 15952
Deposited: 2024-07-25 Deposition Author(s): Jinek, M. , Jungfer, K.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.05 Å
Cryoem structure of enterococcus italicus csm-crrna complex bound to pnppa3 and ampnpp
Primary Citation of Related Structures: 9G9J
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A) | A | 774 | Enterococcus Italicus Dsm 15952 | MHHHHHHHHHHLEVLFQGPSNKKLELMYGSLLHDIGKIVYRSNSVDFAKGTHSKIGSQFLNKFKPFQLSGIVDSVSYHHYKELASSSLLDDSVAYITYIADNIASGTDRRASEGDYEGEGNRQRFDKRAPLASIFNVVNSETKGLANYTYSFEKEQVYRYPTDAKKEYTSSQYAALVNKMTDDLSNKLKVGPDSFSSLLQWTESLWSYIPSSTDTNQVMDVSLYDHSKITCAIASCIYDYLTEMNCVNYRKELFSPYEKTKQFYQEDVFLLVSLDMSGIQDFIYNISGSKALKSLRSRSFYLETMLESLVDDLLSDLELSRANLLYTGGGHAYLLLPNTERARDVLASFEGEMKEWFIKIFKTDLSVAIAYKACTGEDLMNSNGTYSDLWQTVSRKLSDKKAHKYSLNEIKLFNSTIHAGTQECKECLRSDIDISEDSLCKICEGIIAISNDLRDYSFFVVSPEGKVPLPRNRYLSVENQDGAERKIKMNKETRIYSKNQPFVGKQLVTNLWMCDYDFSTLNPETKKQGIASYVNREVGIPRLGVLRADIDNLGTTFIKGIPEQYRSISRTATLSRQLSMFFKFELSNILKGARISVIYSGGDDLFLIGAWDDVISKALVLRKAFTRFSAGKLTFSAGIGMYPVKYPISKMASETGVLEDLAKRGEKNQVALWNDSKVFGWSQLEEQILKEKMIPLQEALTNSQEHGKSFLYKMLELLRNEDQINIARLAYLLARSSLSEELTQSIFAWSQNKQQKVELITAIEYLVYQIREAD |
| CRISPR system Cms protein Csm2 | B | 140 | Enterococcus Italicus Dsm 15952 | MELAKTKTGEMIDLNFARKVVEENKRVKDNRGRQEIVLFNGLTTSKLRNLLELINHVYTKVYNSDDTTLSEDVRDELEYLKVKFAYESGREPAVRTFIEKTYVDKLVDVVLKKNTKKIFLDYCKYFEALVAYAKFYRMGD |
| CRISPR system Cms protein Csm2 | C | 140 | Enterococcus Italicus Dsm 15952 | MELAKTKTGEMIDLNFARKVVEENKRVKDNRGRQEIVLFNGLTTSKLRNLLELINHVYTKVYNSDDTTLSEDVRDELEYLKVKFAYESGREPAVRTFIEKTYVDKLVDVVLKKNTKKIFLDYCKYFEALVAYAKFYRMGD |
| CRISPR system Cms endoribonuclease Csm3 | D | 214 | Enterococcus Italicus Dsm 15952 | MYSKIRIVGKIDVLTGLHIGGGGETSMIGAIASPVVRDPYSRLPIIPGSSIKGKMRSLLAKHIGLIPGQKMHNQDAPEILRLFGSSQKGAIQSSRLQISDAFFSKASQEEFDKKDLAYTETKFENTISRLTAVANPRQIERVTRGASFDFHIIYNVENINEVMADFENIKTAIHLLENDYLGGGGTRGNGRIRFVIDSIDTVVGDFDSSNLSIK |
| CRISPR system Cms endoribonuclease Csm3 | E | 214 | Enterococcus Italicus Dsm 15952 | MYSKIRIVGKIDVLTGLHIGGGGETSMIGAIASPVVRDPYSRLPIIPGSSIKGKMRSLLAKHIGLIPGQKMHNQDAPEILRLFGSSQKGAIQSSRLQISDAFFSKASQEEFDKKDLAYTETKFENTISRLTAVANPRQIERVTRGASFDFHIIYNVENINEVMADFENIKTAIHLLENDYLGGGGTRGNGRIRFVIDSIDTVVGDFDSSNLSIK |
| CRISPR system Cms endoribonuclease Csm3 | F | 214 | Enterococcus Italicus Dsm 15952 | MYSKIRIVGKIDVLTGLHIGGGGETSMIGAIASPVVRDPYSRLPIIPGSSIKGKMRSLLAKHIGLIPGQKMHNQDAPEILRLFGSSQKGAIQSSRLQISDAFFSKASQEEFDKKDLAYTETKFENTISRLTAVANPRQIERVTRGASFDFHIIYNVENINEVMADFENIKTAIHLLENDYLGGGGTRGNGRIRFVIDSIDTVVGDFDSSNLSIK |
| CRISPR system Cms protein Csm4 | G | 307 | Enterococcus Italicus Dsm 15952 | MNQLVVKLVKLTFKSPVHFGMKRLSDSNHTIAADTLFSALIIEALQQQLELSHLLNNLVITDLFPYNKTSYFLPKPLIRIEGKKGDESGYKAFKKLTYIPVENYSEYLRGEIDSLEASKIAESLNLGKASLSTKVSLQAVDHNGESEPYSVGNFTFYPESGLYFLAKGNADTIGQLEILMHALQYSGIGGKRSAGYGQFRCTIEDSGKFDSLLSQTGNIAILLSSAMASDEELVDCLEDARYLLKKRTGFVQSKTYADQLVKKKDFYAFSAGSTFYQKFNGKIFDVSDNGRHSVYRYAKAFWLEGKI |
| CRISPR system Cms protein Csm5 | H | 379 | Enterococcus Italicus Dsm 15952 | MIEKVYQVKLKVYGPVHIGSGKIIRKQEYIYDRRKSLAHIVDGPNLVKFLNKKGKFTAYLQYLNTTKERADLYTFLRQEQIDTNDWKTFVLYTERVNQGKIDMKDHNPYSRTSTNRRQVDKGMNDLHLFVRDGRGDLYIPGSSLKGALRTVLEGANQSAEAFHSLSISDSLPIDPKNLAIYQKIDINKELKPMPLYRECVNVGTTVEFTMKINSDDWTIEKIEKQIQQAYLQYWNKWFVGMVTTPGGKAFIKGGGLPSVLHAKHRPTVLFLGGGTGFPSKTTHYLQKPKEQAQKDIFAILQRRFRNVYGKMATVPKNVPMVLKGTVNDSTNKWYQQGVCLLEFQPIGEALEVLFQGPGGGWSHPQFEKGGGWSHPQFEK |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| crRNA | r | 45 | NA | ACGAGAACAUGCGCGACAUUCCGAAGAACGCUGAAGCGCUGGGGG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-07-25 Deposition Author(s): Jinek, M. , Jungfer, K.