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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9G6V

Dissociated fmdv sat2 pentamer in complex with ultralong fab117

PDB DOI: 10.2210/pdb9g6v/pdb

Classification: VIRUS LIKE PARTICLE
Organism(s): Bos Taurus , Foot-And-Mouth Disease Virus Sat 2

Deposited: 2024-07-19
Deposition Author(s): Clarke, J.D. , Duyvesteyn, H.M.E. , Fry, E.E. , Hammond, J.A. , Owens, R.J. , Ren, J. , Stuart, D.I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

9g6v
Literature

Dissociated fmdv sat2 pentamer in complex with ultralong fab117

Clarke, J.D. , Duyvesteyn, H.M.E. , Fry, E.E. , Hammond, J.A. , Owens, R.J. , Ren, J. , Stuart, D.I.

Primary Citation of Related Structures: 9G6V


Proteins
Molecule Chains Sequence Length Organism Sequence
Genome polyprotein 1 214 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 TTSSGEGADVVTTDPSTHGGAVTEKKRVHTDVAFVMDRFTHVLTNRTAFAVDLMDTNEKTLVGALLRAATYYFCDLEIACLGEHERVWWQPNGAPRTTTLRDNPMVFSHNNVTRFAVPYTAPHRLLSTRYNGECKYTQQSTAIRGDRAVLAAKYANTKHKLPSTFNFGYVTADKPVDVYYRMKRAELYCPRPLLPGYDHADRDRFDSPIGVKKQ
Genome polyprotein B 214 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 TTSSGEGADVVTTDPSTHGGAVTEKKRVHTDVAFVMDRFTHVLTNRTAFAVDLMDTNEKTLVGALLRAATYYFCDLEIACLGEHERVWWQPNGAPRTTTLRDNPMVFSHNNVTRFAVPYTAPHRLLSTRYNGECKYTQQSTAIRGDRAVLAAKYANTKHKLPSTFNFGYVTADKPVDVYYRMKRAELYCPRPLLPGYDHADRDRFDSPIGVKKQ
Genome polyprotein F 214 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 TTSSGEGADVVTTDPSTHGGAVTEKKRVHTDVAFVMDRFTHVLTNRTAFAVDLMDTNEKTLVGALLRAATYYFCDLEIACLGEHERVWWQPNGAPRTTTLRDNPMVFSHNNVTRFAVPYTAPHRLLSTRYNGECKYTQQSTAIRGDRAVLAAKYANTKHKLPSTFNFGYVTADKPVDVYYRMKRAELYCPRPLLPGYDHADRDRFDSPIGVKKQ
Genome polyprotein J 214 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 TTSSGEGADVVTTDPSTHGGAVTEKKRVHTDVAFVMDRFTHVLTNRTAFAVDLMDTNEKTLVGALLRAATYYFCDLEIACLGEHERVWWQPNGAPRTTTLRDNPMVFSHNNVTRFAVPYTAPHRLLSTRYNGECKYTQQSTAIRGDRAVLAAKYANTKHKLPSTFNFGYVTADKPVDVYYRMKRAELYCPRPLLPGYDHADRDRFDSPIGVKKQ
Genome polyprotein N 214 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 TTSSGEGADVVTTDPSTHGGAVTEKKRVHTDVAFVMDRFTHVLTNRTAFAVDLMDTNEKTLVGALLRAATYYFCDLEIACLGEHERVWWQPNGAPRTTTLRDNPMVFSHNNVTRFAVPYTAPHRLLSTRYNGECKYTQQSTAIRGDRAVLAAKYANTKHKLPSTFNFGYVTADKPVDVYYRMKRAELYCPRPLLPGYDHADRDRFDSPIGVKKQ
Genome polyprotein 2 219 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 DKKTEETTLLEDRILTTRHGTTTSTTQSSVGITYGYADADSFRPGPNTSGLETRVEQAERFFKEKLFDWTSDKPFGTLYVLELPKDHKGIYGYLTDAYTYMRNGWDVQVSATSTQFNGGSLLVAMVPELCSLKDREEFQLSLYPHQFINPRTNTTAHIQVPYLGVNRHDQGKRHQAWSLVVMVLTPLTTEAQMQSGTVEVYANIAPTNVFVAGEKPAKQ
Genome polyprotein C 219 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 DKKTEETTLLEDRILTTRHGTTTSTTQSSVGITYGYADADSFRPGPNTSGLETRVEQAERFFKEKLFDWTSDKPFGTLYVLELPKDHKGIYGYLTDAYTYMRNGWDVQVSATSTQFNGGSLLVAMVPELCSLKDREEFQLSLYPHQFINPRTNTTAHIQVPYLGVNRHDQGKRHQAWSLVVMVLTPLTTEAQMQSGTVEVYANIAPTNVFVAGEKPAKQ
Genome polyprotein G 219 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 DKKTEETTLLEDRILTTRHGTTTSTTQSSVGITYGYADADSFRPGPNTSGLETRVEQAERFFKEKLFDWTSDKPFGTLYVLELPKDHKGIYGYLTDAYTYMRNGWDVQVSATSTQFNGGSLLVAMVPELCSLKDREEFQLSLYPHQFINPRTNTTAHIQVPYLGVNRHDQGKRHQAWSLVVMVLTPLTTEAQMQSGTVEVYANIAPTNVFVAGEKPAKQ
Genome polyprotein K 219 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 DKKTEETTLLEDRILTTRHGTTTSTTQSSVGITYGYADADSFRPGPNTSGLETRVEQAERFFKEKLFDWTSDKPFGTLYVLELPKDHKGIYGYLTDAYTYMRNGWDVQVSATSTQFNGGSLLVAMVPELCSLKDREEFQLSLYPHQFINPRTNTTAHIQVPYLGVNRHDQGKRHQAWSLVVMVLTPLTTEAQMQSGTVEVYANIAPTNVFVAGEKPAKQ
Genome polyprotein O 219 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 DKKTEETTLLEDRILTTRHGTTTSTTQSSVGITYGYADADSFRPGPNTSGLETRVEQAERFFKEKLFDWTSDKPFGTLYVLELPKDHKGIYGYLTDAYTYMRNGWDVQVSATSTQFNGGSLLVAMVPELCSLKDREEFQLSLYPHQFINPRTNTTAHIQVPYLGVNRHDQGKRHQAWSLVVMVLTPLTTEAQMQSGTVEVYANIAPTNVFVAGEKPAKQ
Genome polyprotein 3 222 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 GIIPVACFDGYGGFQNTDPKTADPIYGYVYNPSRNDCHGRYSNLLDVAEACPTFLNFDGKPYVVTKNNGDKVMTCFDVAFTHKVHKNTFLAGLADYYAQYQGSLNYHFMYTGPTHHKAKFMVAYIPPGIETDRLPKTPEDAAHCYHSEWDTGLNSQFTFAVPYVSASDFSYTHTDTPAMATTNGWVAVFQVTDTHSAEAAVVVSVSAGPDLEFRFPVDPVRQ
Genome polyprotein D 222 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 GIIPVACFDGYGGFQNTDPKTADPIYGYVYNPSRNDCHGRYSNLLDVAEACPTFLNFDGKPYVVTKNNGDKVMTCFDVAFTHKVHKNTFLAGLADYYAQYQGSLNYHFMYTGPTHHKAKFMVAYIPPGIETDRLPKTPEDAAHCYHSEWDTGLNSQFTFAVPYVSASDFSYTHTDTPAMATTNGWVAVFQVTDTHSAEAAVVVSVSAGPDLEFRFPVDPVRQ
Genome polyprotein H 222 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 GIIPVACFDGYGGFQNTDPKTADPIYGYVYNPSRNDCHGRYSNLLDVAEACPTFLNFDGKPYVVTKNNGDKVMTCFDVAFTHKVHKNTFLAGLADYYAQYQGSLNYHFMYTGPTHHKAKFMVAYIPPGIETDRLPKTPEDAAHCYHSEWDTGLNSQFTFAVPYVSASDFSYTHTDTPAMATTNGWVAVFQVTDTHSAEAAVVVSVSAGPDLEFRFPVDPVRQ
Genome polyprotein L 222 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 GIIPVACFDGYGGFQNTDPKTADPIYGYVYNPSRNDCHGRYSNLLDVAEACPTFLNFDGKPYVVTKNNGDKVMTCFDVAFTHKVHKNTFLAGLADYYAQYQGSLNYHFMYTGPTHHKAKFMVAYIPPGIETDRLPKTPEDAAHCYHSEWDTGLNSQFTFAVPYVSASDFSYTHTDTPAMATTNGWVAVFQVTDTHSAEAAVVVSVSAGPDLEFRFPVDPVRQ
Genome polyprotein P 222 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 GIIPVACFDGYGGFQNTDPKTADPIYGYVYNPSRNDCHGRYSNLLDVAEACPTFLNFDGKPYVVTKNNGDKVMTCFDVAFTHKVHKNTFLAGLADYYAQYQGSLNYHFMYTGPTHHKAKFMVAYIPPGIETDRLPKTPEDAAHCYHSEWDTGLNSQFTFAVPYVSASDFSYTHTDTPAMATTNGWVAVFQVTDTHSAEAAVVVSVSAGPDLEFRFPVDPVRQ
Fab117 Heavy Chain A 308 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH
Fab117 Heavy Chain E 308 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH
Fab117 Heavy Chain I 308 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH
Fab117 Heavy Chain M 308 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH
Fab117 Heavy Chain Q 308 Bos Taurus , Foot-And-Mouth Disease Virus Sat 2 MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-19
Deposition Author(s): Clarke, J.D. , Duyvesteyn, H.M.E. , Fry, E.E. , Hammond, J.A. , Owens, R.J. , Ren, J. , Stuart, D.I.