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FASTA Sequence PDB Format mmCIF Format
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9G05

Structure of madb, a class i dehydrates from clostridium maddingley, in complex with its substrate

PDB DOI: 10.2210/pdb9g05/pdb

Classification: BIOSYNTHETIC PROTEIN
Organism(s): Clostridium Sp. Maddingley Mbc34-26 , Synthetic Construct

Deposited: 2024-07-07
Deposition Author(s): Gerten, C. , Kedrov, A. , Knospe, C.V. , Ortiz, J. , Reiners, J. , Schmitt, L. , Smits, S.H.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.13 Å

9g05
Literature

Structure of madb, a class i dehydrates from clostridium maddingley, in complex with its substrate

Gerten, C. , Kedrov, A. , Knospe, C.V. , Ortiz, J. , Reiners, J. , Schmitt, L. , Smits, S.H.J.

Primary Citation of Related Structures: 9G05


Proteins
Molecule Chains Sequence Length Organism Sequence
Thiopeptide-type bacteriocin biosynthesis domain containing protein A 1038 Clostridium Sp. Maddingley Mbc34-26 , Synthetic Construct MRDLYRNTNTFMIRTPIFSIDNYYEFFRKDGESDKIKDRLLEICNNSVFREAILVSSKSLYSTIIDFCDGKEIKKFDYFLQSIYKYLIRMSMRPTPFGLFSGVDFGKYAEETVISYENDNFKKFARPDLEWIIKIVKELEDNHYKNLTFKINDSIFIKGERALLIHSTDKEDNNRIGEISIRATKPFMRTYDLAKDGIEYNKLKYILIDEYSIEDESKIDNFLKQLIEREFLISNLRPPLTVLDQFDYLINEVKKAEIEIPLVDELTEIKEKLKLYNETPVGAGEETYLELYKKMESVANVKNILQVDMKLNLRDKKINKKIISDVNDLMNILLDLSMSIENPEPFLSKYKQEFIEKYGQDREISLLEMLDNDIGIGPPMNYERPRNNRSLDVSVNELLDNNVRDYFMEKYFQALKTNSRNIAIRDDEIKNLELQKIDYENIPDSLEINLLVKNKSEDNLSDEFQYYIGPNLGSTSAGKSFGRFSHMMSEPKKFFEELDERNIELIDSEEYVTCEISYLPSEVRNANVTRNIHSSEYEMSLFTNGSKDNLYRIKLNDIYIGLENNTFYAKSKTLNKKLLLTINNMLNPQTAPNAIRFLNDISLDEKKLWYKFVWSDVYKDFSYIPAIKYKNFVIMPETWKMNKINMKINKKTEFNEFKNQFNDYRIKYGVPQYVYITFADNRILLNLDDEQCVKILYHECKNSFNEIILNSYEEEGVNIVKESHKDYICELVIPLTKIKQETISDKVSARMLSSDISSLSKERVKDPFDEWLYIKLYGISSNVDDLIAYYISEFCNELVEEEIISKYFFMRYVDPEQHIRLRLNSSQEKLLMIYPKIREWLSMIRKKGLMTYFSIDSYDREIERYGGIELINIAEKVFFFDSIVTEDILRAKREGSFDFCDEIIGMISVVHYMESFGLPYAKQVEFLRSQVSSSEYREDFKQKRTEYMKLCNSNKDWEGLRESEEGNILIEILNKRRKIIEYYGNKVRENEEVSTDLSILDSIIHLNCNRMFGIDREFEKKVRALASHALYALKHFKS
Thiopeptide-type bacteriocin biosynthesis domain containing protein B 1038 Clostridium Sp. Maddingley Mbc34-26 , Synthetic Construct MRDLYRNTNTFMIRTPIFSIDNYYEFFRKDGESDKIKDRLLEICNNSVFREAILVSSKSLYSTIIDFCDGKEIKKFDYFLQSIYKYLIRMSMRPTPFGLFSGVDFGKYAEETVISYENDNFKKFARPDLEWIIKIVKELEDNHYKNLTFKINDSIFIKGERALLIHSTDKEDNNRIGEISIRATKPFMRTYDLAKDGIEYNKLKYILIDEYSIEDESKIDNFLKQLIEREFLISNLRPPLTVLDQFDYLINEVKKAEIEIPLVDELTEIKEKLKLYNETPVGAGEETYLELYKKMESVANVKNILQVDMKLNLRDKKINKKIISDVNDLMNILLDLSMSIENPEPFLSKYKQEFIEKYGQDREISLLEMLDNDIGIGPPMNYERPRNNRSLDVSVNELLDNNVRDYFMEKYFQALKTNSRNIAIRDDEIKNLELQKIDYENIPDSLEINLLVKNKSEDNLSDEFQYYIGPNLGSTSAGKSFGRFSHMMSEPKKFFEELDERNIELIDSEEYVTCEISYLPSEVRNANVTRNIHSSEYEMSLFTNGSKDNLYRIKLNDIYIGLENNTFYAKSKTLNKKLLLTINNMLNPQTAPNAIRFLNDISLDEKKLWYKFVWSDVYKDFSYIPAIKYKNFVIMPETWKMNKINMKINKKTEFNEFKNQFNDYRIKYGVPQYVYITFADNRILLNLDDEQCVKILYHECKNSFNEIILNSYEEEGVNIVKESHKDYICELVIPLTKIKQETISDKVSARMLSSDISSLSKERVKDPFDEWLYIKLYGISSNVDDLIAYYISEFCNELVEEEIISKYFFMRYVDPEQHIRLRLNSSQEKLLMIYPKIREWLSMIRKKGLMTYFSIDSYDREIERYGGIELINIAEKVFFFDSIVTEDILRAKREGSFDFCDEIIGMISVVHYMESFGLPYAKQVEFLRSQVSSSEYREDFKQKRTEYMKLCNSNKDWEGLRESEEGNILIEILNKRRKIIEYYGNKVRENEEVSTDLSILDSIIHLNCNRMFGIDREFEKKVRALASHALYALKHFKS
Lantibiotic, gallidermin/nisin family C 56 Clostridium Sp. Maddingley Mbc34-26 , Synthetic Construct MGKLDDFDLDVKVKADTTKVGPAITSKSLCTPGCITGVLMCITQNSCVSCKSCIKC
Lantibiotic, gallidermin/nisin family D 56 Clostridium Sp. Maddingley Mbc34-26 , Synthetic Construct MGKLDDFDLDVKVKADTTKVGPAITSKSLCTPGCITGVLMCITQNSCVSCKSCIKC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-07-07
Deposition Author(s): Gerten, C. , Kedrov, A. , Knospe, C.V. , Ortiz, J. , Reiners, J. , Schmitt, L. , Smits, S.H.J.