PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9FVE

Crystal structure of vcsiap w73a mutant in complex with sialic acid and a vhh antibody (vhh_vcp#2)

PDB DOI: 10.2210/pdb9fve/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Vicugna Pacos

Deposited: 2024-06-26
Deposition Author(s): Hagelueken, G. , Schneberger, N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.81 Å

9fve
Literature

Crystal structure of vcsiap w73a mutant in complex with sialic acid and a vhh antibody (vhh_vcp#2)

Hagelueken, G. , Schneberger, N.

Primary Citation of Related Structures: 9FVE


Proteins
Molecule Chains Sequence Length Organism Sequence
Sialic acid-binding periplasmic protein SiaP A 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP C 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP E 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP G 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP I 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP K 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP M 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP O 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP Q 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP U 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP W 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
Sialic acid-binding periplasmic protein SiaP Y 303 Vicugna Pacos GAMGATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQLGDDRAMLQQLTLGDLDITYAEFGRMGLAIPRAEAVMLPYVAKDFDHLRRMFESDFGQGVRDEMLQKFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASPTPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQKLSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKEFDSNIGQPIVSKLAAM
VHH_VcP#2 B 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 D 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 F 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 H 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 J 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 L 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 N 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 P 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 R 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 T 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 V 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
VHH_VcP#2 X 123 Vicugna Pacos GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-06-26
Deposition Author(s): Hagelueken, G. , Schneberger, N.