PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9FKD

Progesterone-bound db3 fab in complex with computationally designed dbpro1156_2 protein binder

PDB DOI: 10.2210/pdb9fkd/pdb

Classification: DE NOVO PROTEIN
Organism(s): Fremyella Diplosiphon

Deposited: 2024-06-03
Deposition Author(s): Correia, B.E. , Marchand, A. , Pacesa, M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

9fkd
Literature

Progesterone-bound db3 fab in complex with computationally designed dbpro1156_2 protein binder

Correia, B.E. , Marchand, A. , Pacesa, M.

Primary Citation of Related Structures: 9FKD


Proteins
Molecule Chains Sequence Length Organism Sequence
De novo designed DBPro1156_2 binder B 70 Fremyella Diplosiphon DEKAKTAETLIWQLFGKAMQQSDPNEAEKLLKKAEELAKKANDPRLEQVVRQHQVVVRFLVGGSHHHHHH
DB3 Fab Heavy chain H 239 Fremyella Diplosiphon ETGQIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAYLEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTGTKHHHHHH
DB3 Fab Light Chain L 222 Fremyella Diplosiphon ETGDVVMTQIPLSLPVSLGEQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Anti-kappa Fab Light Chain K 217 Fremyella Diplosiphon ETGSIVMTQTPKFLFVSAGDRVTITCKASQSVSNDVEWYQQKPGQSPKLMIYFASKRYNGVPDRFTGSGFGTEFTFTISTVQAEDLAVYFCQQDYSSPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC
Anti-kappa Fab Heavy Chain I 235 Fremyella Diplosiphon ETGEVKLLESGGGLVQPGRSLRLSCIASGFDFSGYWMTWVRQAPGKGLEWIGDINPDSSTINSTPSLKDKVIISRDNAKNTLFLQMSKVRSEDTALYYCAQRGNYVPFPYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKGTKHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-06-03
Deposition Author(s): Correia, B.E. , Marchand, A. , Pacesa, M.