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FASTA Sequence PDB Format mmCIF Format
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9F7M

Blastococcus orn bound to pgg

PDB DOI: 10.2210/pdb9f7m/pdb

Classification: HYDROLASE
Organism(s): Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2024-05-04
Deposition Author(s): Mortensen, S. , Sondermann, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.65 Å

9f7m
Literature

Blastococcus orn bound to pgg

Mortensen, S. , Sondermann, H.

Primary Citation of Related Structures: 9F7M


Proteins
Molecule Chains Sequence Length Organism Sequence
Oligoribonuclease A 219 Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMADSAGHLVWIDCEMTGLDLVEDKLIEVAVLITDSELNVLDPGLDLIISADDAALDGMNEVVRTMHEKSGLTEEVRASTLTVAEAEQQVLAYIKRWVPERRTAPLCGNSIGTDRGFLARDMPELDDHLHYRMIDVSSVKELARRWFPRVYFGQPAKGLAHRALADIIESVRELAYYRRTVFVDSPGPSSSQAKKAAAEVVGGFAALLDGDEKAPAPGA
Oligoribonuclease B 219 Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMADSAGHLVWIDCEMTGLDLVEDKLIEVAVLITDSELNVLDPGLDLIISADDAALDGMNEVVRTMHEKSGLTEEVRASTLTVAEAEQQVLAYIKRWVPERRTAPLCGNSIGTDRGFLARDMPELDDHLHYRMIDVSSVKELARRWFPRVYFGQPAKGLAHRALADIIESVRELAYYRRTVFVDSPGPSSSQAKKAAAEVVGGFAALLDGDEKAPAPGA
Oligoribonuclease C 219 Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMADSAGHLVWIDCEMTGLDLVEDKLIEVAVLITDSELNVLDPGLDLIISADDAALDGMNEVVRTMHEKSGLTEEVRASTLTVAEAEQQVLAYIKRWVPERRTAPLCGNSIGTDRGFLARDMPELDDHLHYRMIDVSSVKELARRWFPRVYFGQPAKGLAHRALADIIESVRELAYYRRTVFVDSPGPSSSQAKKAAAEVVGGFAALLDGDEKAPAPGA
Oligoribonuclease D 219 Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMADSAGHLVWIDCEMTGLDLVEDKLIEVAVLITDSELNVLDPGLDLIISADDAALDGMNEVVRTMHEKSGLTEEVRASTLTVAEAEQQVLAYIKRWVPERRTAPLCGNSIGTDRGFLARDMPELDDHLHYRMIDVSSVKELARRWFPRVYFGQPAKGLAHRALADIIESVRELAYYRRTVFVDSPGPSSSQAKKAAAEVVGGFAALLDGDEKAPAPGA
Oligoribonuclease E 219 Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMADSAGHLVWIDCEMTGLDLVEDKLIEVAVLITDSELNVLDPGLDLIISADDAALDGMNEVVRTMHEKSGLTEEVRASTLTVAEAEQQVLAYIKRWVPERRTAPLCGNSIGTDRGFLARDMPELDDHLHYRMIDVSSVKELARRWFPRVYFGQPAKGLAHRALADIIESVRELAYYRRTVFVDSPGPSSSQAKKAAAEVVGGFAALLDGDEKAPAPGA
Oligoribonuclease F 219 Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMADSAGHLVWIDCEMTGLDLVEDKLIEVAVLITDSELNVLDPGLDLIISADDAALDGMNEVVRTMHEKSGLTEEVRASTLTVAEAEQQVLAYIKRWVPERRTAPLCGNSIGTDRGFLARDMPELDDHLHYRMIDVSSVKELARRWFPRVYFGQPAKGLAHRALADIIESVRELAYYRRTVFVDSPGPSSSQAKKAAAEVVGGFAALLDGDEKAPAPGA
Oligoribonuclease G 219 Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMADSAGHLVWIDCEMTGLDLVEDKLIEVAVLITDSELNVLDPGLDLIISADDAALDGMNEVVRTMHEKSGLTEEVRASTLTVAEAEQQVLAYIKRWVPERRTAPLCGNSIGTDRGFLARDMPELDDHLHYRMIDVSSVKELARRWFPRVYFGQPAKGLAHRALADIIESVRELAYYRRTVFVDSPGPSSSQAKKAAAEVVGGFAALLDGDEKAPAPGA
Oligoribonuclease H 219 Dugbe Virus (Isolate Ard44313) , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) SMADSAGHLVWIDCEMTGLDLVEDKLIEVAVLITDSELNVLDPGLDLIISADDAALDGMNEVVRTMHEKSGLTEEVRASTLTVAEAEQQVLAYIKRWVPERRTAPLCGNSIGTDRGFLARDMPELDDHLHYRMIDVSSVKELARRWFPRVYFGQPAKGLAHRALADIIESVRELAYYRRTVFVDSPGPSSSQAKKAAAEVVGGFAALLDGDEKAPAPGA

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*G)-3') i 2 NA GG
RNA (5'-R(P*GP*G)-3') j 2 NA GG
RNA (5'-R(P*GP*G)-3') k 2 NA GG
RNA (5'-R(P*GP*G)-3') l 2 NA GG
RNA (5'-R(P*GP*G)-3') m 2 NA GG
RNA (5'-R(P*GP*G)-3') n 2 NA GG
RNA (5'-R(P*GP*G)-3') o 2 NA GG
RNA (5'-R(P*GP*G)-3') p 2 NA GG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-05-04
Deposition Author(s): Mortensen, S. , Sondermann, H.