9F13
Crystal structure of hla-c*12:02 in complex with kaynvtqaf (kf9), a 9-mer epitope from sars-cov-2 nucleocapsid (n266-274)
PDB DOI: 10.2210/pdb9f13/pdb
Classification: IMMUNE SYSTEM Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)
Deposited: 2024-04-18 Deposition Author(s): Ahn, Y.M. , Chatzileontiadou, D.S.M. , Gras, S. , Maddumage, J.C.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.61 Å
Crystal structure of hla-c*12:02 in complex with kaynvtqaf (kf9), a 9-mer epitope from sars-cov-2 nucleocapsid (n266-274)
Ahn, Y.M. , Chatzileontiadou, D.S.M. , Gras, S. , Maddumage, J.C.
Primary Citation of Related Structures: 9F13
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HLA class I histocompatibility antigen C alpha chain | A | 366 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MRVMAPRTLILLLSGALALTETWACSHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEAGSHTLQRMYGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAAREAEQWRAYLEGTCVEWLRRYLENGKETLQRAEHPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPLTLRWEPSSQPTIPIVGIVAGLAVLAVLAVLGAVMAVVMCRRKSSGGKGGSCSQAASSNSAQGSDESLIACKA |
| Beta-2-microglobulin | B | 100 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Nucleoprotein | C | 9 | Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) | KAYNVTQAF |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-04-18 Deposition Author(s): Ahn, Y.M. , Chatzileontiadou, D.S.M. , Gras, S. , Maddumage, J.C.