9EOT
Structure of human ceramide synthase 6 (cers6) bound to c16:0 (nanobody nb02)
PDB DOI: 10.2210/pdb9eot/pdb
Classification: MEMBRANE PROTEIN Organism(s): Homo Sapiens , Vicugna Pacos
Deposited: 2024-03-15 Deposition Author(s): Carpenter, E.P. , Chalk, R. , Chi, G. , Chu, A. , Cole, V. , Dix, C. , Elkins, J.M. , Moreira, T. , Mukhopadhyay, S.M.M. , Pascoa, T.C. , Pautsch, A. , Pike, A.C.W. , Quigley, A. , Sauer, D.B. , Schnapp, G. , Stefanic, S. , Tessitore, A. , Venkaya, S.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.02 Å
Structure of human ceramide synthase 6 (cers6) bound to c16:0 (nanobody nb02)
Carpenter, E.P. , Chalk, R. , Chi, G. , Chu, A. , Cole, V. , Dix, C. , Elkins, J.M. , Moreira, T. , Mukhopadhyay, S.M.M. , Pascoa, T.C. , Pautsch, A. , Pike, A.C.W. , Quigley, A. , Sauer, D.B. , Schnapp, G. , Stefanic, S. , Tessitore, A. , Venkaya, S.
Primary Citation of Related Structures: 9EOT
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Isoform 2 of Ceramide synthase 6 | A | 357 | Homo Sapiens , Vicugna Pacos | MAGILAWFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIALNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKAGKWNPLHVSKDDRSDAENLYFQ |
| Isoform 2 of Ceramide synthase 6 | C | 357 | Homo Sapiens , Vicugna Pacos | MAGILAWFWNERFWLPHNVTWADLKNTEEATFPQAEDLYLAFPLAFCIFMVRLIFERFVAKPCAIALNIQANGPQIAPPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQRWFRQRRNQEKPSTLTRFCESMWRFSFYLYVFTYGVRFLKKTPWLWNTRHCWYNYPYQPLTTDLHYYYILELSFYWSLMFSQFTDIKRKDFGIMFLHHLVSIFLITFSYVNNMARVGTLVLCLHDSADALLEAAKMANYAKFQKMCDLLFVMFAVVFITTRLGIFPLWVLNTTLFESWEIVGPYPSWWVFNLLLLLVQGLNCFWSYLIVKIACKAVSRGKAGKWNPLHVSKDDRSDAENLYFQ |
| Nanobody-02 | B | 134 | Homo Sapiens , Vicugna Pacos | QLQFVESGGGLVQAGGSLRLSCAASGRTFSRYAVGWFRQAPGKEREFVASITWNGATTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCALDLYSYGTRDVADFGSWGKGTRVTVSSHHHHHHEPEA |
| Nanobody-02 | D | 134 | Homo Sapiens , Vicugna Pacos | QLQFVESGGGLVQAGGSLRLSCAASGRTFSRYAVGWFRQAPGKEREFVASITWNGATTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCALDLYSYGTRDVADFGSWGKGTRVTVSSHHHHHHEPEA |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-03-15 Deposition Author(s): Carpenter, E.P. , Chalk, R. , Chi, G. , Chu, A. , Cole, V. , Dix, C. , Elkins, J.M. , Moreira, T. , Mukhopadhyay, S.M.M. , Pascoa, T.C. , Pautsch, A. , Pike, A.C.W. , Quigley, A. , Sauer, D.B. , Schnapp, G. , Stefanic, S. , Tessitore, A. , Venkaya, S.