PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9EKF

Cryoem structure of h5n1 a/texas/37/2024 ha bound to fab 65c6 and an auto glycan occupying the receptor-binding site

PDB DOI: 10.2210/pdb9ekf/pdb

Classification: VIRAL PROTEIN
Organism(s): Homo Sapiens , Influenza A Virus

Deposited: 2024-12-02
Deposition Author(s): Kwong, P.D. , Morano, N.C. , Shapiro, L.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.68 Å

Literature

Cryoem structure of h5n1 a/texas/37/2024 ha bound to fab 65c6 and an auto glycan occupying the receptor-binding site

Kwong, P.D. , Morano, N.C. , Shapiro, L.

Primary Citation of Related Structures: 9EKF


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin A 576 Homo Sapiens , Influenza A Virus MENIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHMLSRINHFEKIQIIPKSSWPNHETSLGVSAACPYQGAPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPITYISVGTSTLNQRLAPKIATRSQVNGQRGRMDFFWTILKPDDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRNSPLRRRRRRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREGSSGSSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHHHHHGGSGLNDIFEAQKIEWHE
Hemagglutinin B 576 Homo Sapiens , Influenza A Virus MENIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHMLSRINHFEKIQIIPKSSWPNHETSLGVSAACPYQGAPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPITYISVGTSTLNQRLAPKIATRSQVNGQRGRMDFFWTILKPDDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRNSPLRRRRRRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREGSSGSSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHHHHHGGSGLNDIFEAQKIEWHE
Hemagglutinin C 576 Homo Sapiens , Influenza A Virus MENIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHMLSRINHFEKIQIIPKSSWPNHETSLGVSAACPYQGAPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPITYISVGTSTLNQRLAPKIATRSQVNGQRGRMDFFWTILKPDDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGLRNSPLRRRRRRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQYSEEARLKREGSSGSSGYIPEAPRDGQAYVRKDGEWVLLSTFLGHHHHHHHHHGGSGLNDIFEAQKIEWHE
Fab 65C6 Heavy Chain D 237 Homo Sapiens , Influenza A Virus EVQLVQSGAEVKKPGESLRISCKGFAYSSTYFWISWVRQMPGKGLEWMGRIDPTDSYINYSPSFQGHVTISVDRSISTVYLQWSSLKASDTAMYYCAYHRRGHFYGSGSAWDWFESWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVESASCDKTHTCP
Fab 65C6 Heavy Chain G 237 Homo Sapiens , Influenza A Virus EVQLVQSGAEVKKPGESLRISCKGFAYSSTYFWISWVRQMPGKGLEWMGRIDPTDSYINYSPSFQGHVTISVDRSISTVYLQWSSLKASDTAMYYCAYHRRGHFYGSGSAWDWFESWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVESASCDKTHTCP
Fab 65C6 Heavy Chain H 237 Homo Sapiens , Influenza A Virus EVQLVQSGAEVKKPGESLRISCKGFAYSSTYFWISWVRQMPGKGLEWMGRIDPTDSYINYSPSFQGHVTISVDRSISTVYLQWSSLKASDTAMYYCAYHRRGHFYGSGSAWDWFESWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVESASCDKTHTCP
Fab 65C6 Light Chain I 214 Homo Sapiens , Influenza A Virus EIVLTQSPLTLSVSPGERATLSCRASQSVSSNLAWYQQMPGQAPRLLIYGASTRATGIPARLSGSASGTEFTLTISSLQSEDFAVYYCQQYNNWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 65C6 Light Chain K 214 Homo Sapiens , Influenza A Virus EIVLTQSPLTLSVSPGERATLSCRASQSVSSNLAWYQQMPGQAPRLLIYGASTRATGIPARLSGSASGTEFTLTISSLQSEDFAVYYCQQYNNWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Fab 65C6 Light Chain L 214 Homo Sapiens , Influenza A Virus EIVLTQSPLTLSVSPGERATLSCRASQSVSSNLAWYQQMPGQAPRLLIYGASTRATGIPARLSGSASGTEFTLTISSLQSEDFAVYYCQQYNNWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-12-02
Deposition Author(s): Kwong, P.D. , Morano, N.C. , Shapiro, L.