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FASTA Sequence PDB Format mmCIF Format
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9EHM

Structure of hiv-1 bg505 sosip.664 env trimer in complex with iomamin5 and 10-1074 broadly neutralizing antibodies - class ii

PDB DOI: 10.2210/pdb9ehm/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2024-11-23
Deposition Author(s): Bjorkman, P.J. , Dam, K.A. , Yang, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.2 Å

Literature

Structure of hiv-1 bg505 sosip.664 env trimer in complex with iomamin5 and 10-1074 broadly neutralizing antibodies - class ii

Bjorkman, P.J. , Dam, K.A. , Yang, Z.

Primary Citation of Related Structures: 9EHM


Proteins
Molecule Chains Sequence Length Organism Sequence
HIV-1 BG505 SOSIP gp120,Envelope glycoprotein gp120 A 506 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPAGAGSNLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
HIV-1 BG505 SOSIP gp120,Envelope glycoprotein gp120 B 506 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPAGAGSNLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
HIV-1 BG505 SOSIP gp120,Envelope glycoprotein gp120 C 506 Homo Sapiens , Human Immunodeficiency Virus 1 MDAMKRGLCCVLLLCGAVFVSPAGAGSNLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQAMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR
HIV-1 BG505 SOSIP gp41 D 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
HIV-1 BG505 SOSIP gp41 E 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
HIV-1 BG505 SOSIP gp41 F 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD
IOMAmin5 Fab Heavy Chain H 128 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLVQSGAQVKKPGASVTVSCTASGYTFTGYHMHWVRQAPGQGLEWMGWINPFRGAVKYAQKFRGRVSMTRDTSIEIFYMELSRLRSDDTAVYYCAREMFDSSADWSPWRGMVAWGQGTLVTVSSAS
IOMAmin5 Fab Heavy Chain I 128 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLVQSGAQVKKPGASVTVSCTASGYTFTGYHMHWVRQAPGQGLEWMGWINPFRGAVKYAQKFRGRVSMTRDTSIEIFYMELSRLRSDDTAVYYCAREMFDSSADWSPWRGMVAWGQGTLVTVSSAS
IOMAmin5 Fab Light Chain K 111 Homo Sapiens , Human Immunodeficiency Virus 1 QSALTQPASVSGSPGQSITISCTGSSRDVGGFDLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSASKSGNTASLTISGLQAEDEADYYCYSYADGVAFGGGTKLTVLGQP
IOMAmin5 Fab Light Chain L 111 Homo Sapiens , Human Immunodeficiency Virus 1 QSALTQPASVSGSPGQSITISCTGSSRDVGGFDLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSASKSGNTASLTISGLQAEDEADYYCYSYADGVAFGGGTKLTVLGQP
10-1074 Fab Heavy Chain M 134 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
10-1074 Fab Heavy Chain N 134 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
10-1074 Fab Heavy Chain O 134 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
10-1074 Fab Light Chain P 110 Homo Sapiens , Human Immunodeficiency Virus 1 YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
10-1074 Fab Light Chain Q 110 Homo Sapiens , Human Immunodeficiency Virus 1 YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
10-1074 Fab Light Chain R 110 Homo Sapiens , Human Immunodeficiency Virus 1 YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-11-23
Deposition Author(s): Bjorkman, P.J. , Dam, K.A. , Yang, Z.