9EH8
Structure of the prefusion hku5-19s spike trimer (conformation 2)
PDB DOI: 10.2210/pdb9eh8/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Pipistrellus Bat Coronavirus Hku5
Deposited: 2024-11-22 Deposition Author(s): Gen, R. , Park, Y.J. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.0 Å
Structure of the prefusion hku5-19s spike trimer (conformation 2)
Gen, R. , Park, Y.J. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.
Primary Citation of Related Structures: 9EH8
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike glycoprotein | A | 1365 | Pipistrellus Bat Coronavirus Hku5 | MGILPSPGMPALLSLVSLLSVLLMGCVAETGTQSVDMGTTGSGNCIESQVQPDFFETARNTWPLSIDTSKAEGVIYPNGKSYSNITLTYTGLYPKANDLGKQYVFSDGHSSPGTLSRLFVSNYSRQVEPFDSGFVVRIGAAANKTGTTIISQSTNRPIKKIYPAFMLGHSVGNYTPTNITGRYLNHTLVILPDGCGTLVHAFYCILQPRTQAYCAGASTFTSVTVWDTPASDCANSQSYNRLANLNAFKLYFDLINCTFRYNYTITEDENAEWFGITQDTQGVHLYSSRKENVFRNNMFHFATLPVYQKILYYTVIPRSIRSPFNDRKAWAAFYIYKLHPLTYLLNFDVEGYITKAVDCGYDDLAQLQCSYQSFDVETGVYSVSSFEASPRGEFIEQATTQECDFTPMLTGTPPPIYNFKRLVFTNCNYNLTKLLSLFQVSEFSCHQVSPSSLATGCYSSLTVDYFAYSTDMSSYLQPGSAGEIVQFNYKQDFSNPTCRVLATVPQNLTTITKPSNYAYLTECYKTSAYGKNYLYNAPGGYTPCLSLASRGFSTKYQSHSDGELTTTGYIYPVTGNLQMAFIISVQYGTDTNSVCPMQALRNDTSIEDKLDVCVEYSLHGITGRGVFHNCTSVGLRNQRFVYDTFDNLVGYHSYNGNYYCVRPCVSVPVSVIYDKVSNSHATLFGSVACSHVTTMMSQFSRMTKTNLLARTTPGPLQTVVGCAMGFINTSMVVDECQLPLGQSLCAIPPNPSARLARASSGVTDVFQIATLNFTSPLTLAPINSTGFVVAVPTNFTFGVTQEYIETTIQKITVDCKQYVCNGFKKCEELLTEYGQFCSKINQALHGANLRQDESIANLFSSIKTQNTQPLQAGLNGDFNLTMLQIPQVTTGERKYRSAIEDLLFNKVTIADPGYMQGYDECMQQGPQSARDLICAQYVAGYKVLPPLYDPYMEAAYTSSLLGSIAGASWTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKIIANKFNQALGAMQTGFTTTNLAFNKVQDAVNANAMALSKLAAELSNTFGAISSSISDILARLDPPEQEAQIDRLINGRLTSLNAFVAQQLVRTEAAARSAQLAQDKVNECVKSQSKRNGFCGTGTHIVSFAINAPNGLYFFHVGYQPTSHVNATAAYGLCNTENPPKCIAPIGGYFVLNQTTSTVANSEQQWYYTGSSFFHPEPITEVNSKYVSMDVKFENLTNKLPPPLLSNTTDLDFKEELEEFFKNVSSQGPNFQEISKINTTLLNLNTELMVLSEVVKQLNESYIDLKELGNYTFYQKGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGGSGLNDIFEAQKIEWHEGGSHHHHHHHH |
| Spike glycoprotein | B | 1365 | Pipistrellus Bat Coronavirus Hku5 | MGILPSPGMPALLSLVSLLSVLLMGCVAETGTQSVDMGTTGSGNCIESQVQPDFFETARNTWPLSIDTSKAEGVIYPNGKSYSNITLTYTGLYPKANDLGKQYVFSDGHSSPGTLSRLFVSNYSRQVEPFDSGFVVRIGAAANKTGTTIISQSTNRPIKKIYPAFMLGHSVGNYTPTNITGRYLNHTLVILPDGCGTLVHAFYCILQPRTQAYCAGASTFTSVTVWDTPASDCANSQSYNRLANLNAFKLYFDLINCTFRYNYTITEDENAEWFGITQDTQGVHLYSSRKENVFRNNMFHFATLPVYQKILYYTVIPRSIRSPFNDRKAWAAFYIYKLHPLTYLLNFDVEGYITKAVDCGYDDLAQLQCSYQSFDVETGVYSVSSFEASPRGEFIEQATTQECDFTPMLTGTPPPIYNFKRLVFTNCNYNLTKLLSLFQVSEFSCHQVSPSSLATGCYSSLTVDYFAYSTDMSSYLQPGSAGEIVQFNYKQDFSNPTCRVLATVPQNLTTITKPSNYAYLTECYKTSAYGKNYLYNAPGGYTPCLSLASRGFSTKYQSHSDGELTTTGYIYPVTGNLQMAFIISVQYGTDTNSVCPMQALRNDTSIEDKLDVCVEYSLHGITGRGVFHNCTSVGLRNQRFVYDTFDNLVGYHSYNGNYYCVRPCVSVPVSVIYDKVSNSHATLFGSVACSHVTTMMSQFSRMTKTNLLARTTPGPLQTVVGCAMGFINTSMVVDECQLPLGQSLCAIPPNPSARLARASSGVTDVFQIATLNFTSPLTLAPINSTGFVVAVPTNFTFGVTQEYIETTIQKITVDCKQYVCNGFKKCEELLTEYGQFCSKINQALHGANLRQDESIANLFSSIKTQNTQPLQAGLNGDFNLTMLQIPQVTTGERKYRSAIEDLLFNKVTIADPGYMQGYDECMQQGPQSARDLICAQYVAGYKVLPPLYDPYMEAAYTSSLLGSIAGASWTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKIIANKFNQALGAMQTGFTTTNLAFNKVQDAVNANAMALSKLAAELSNTFGAISSSISDILARLDPPEQEAQIDRLINGRLTSLNAFVAQQLVRTEAAARSAQLAQDKVNECVKSQSKRNGFCGTGTHIVSFAINAPNGLYFFHVGYQPTSHVNATAAYGLCNTENPPKCIAPIGGYFVLNQTTSTVANSEQQWYYTGSSFFHPEPITEVNSKYVSMDVKFENLTNKLPPPLLSNTTDLDFKEELEEFFKNVSSQGPNFQEISKINTTLLNLNTELMVLSEVVKQLNESYIDLKELGNYTFYQKGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGGSGLNDIFEAQKIEWHEGGSHHHHHHHH |
| Spike glycoprotein | C | 1365 | Pipistrellus Bat Coronavirus Hku5 | MGILPSPGMPALLSLVSLLSVLLMGCVAETGTQSVDMGTTGSGNCIESQVQPDFFETARNTWPLSIDTSKAEGVIYPNGKSYSNITLTYTGLYPKANDLGKQYVFSDGHSSPGTLSRLFVSNYSRQVEPFDSGFVVRIGAAANKTGTTIISQSTNRPIKKIYPAFMLGHSVGNYTPTNITGRYLNHTLVILPDGCGTLVHAFYCILQPRTQAYCAGASTFTSVTVWDTPASDCANSQSYNRLANLNAFKLYFDLINCTFRYNYTITEDENAEWFGITQDTQGVHLYSSRKENVFRNNMFHFATLPVYQKILYYTVIPRSIRSPFNDRKAWAAFYIYKLHPLTYLLNFDVEGYITKAVDCGYDDLAQLQCSYQSFDVETGVYSVSSFEASPRGEFIEQATTQECDFTPMLTGTPPPIYNFKRLVFTNCNYNLTKLLSLFQVSEFSCHQVSPSSLATGCYSSLTVDYFAYSTDMSSYLQPGSAGEIVQFNYKQDFSNPTCRVLATVPQNLTTITKPSNYAYLTECYKTSAYGKNYLYNAPGGYTPCLSLASRGFSTKYQSHSDGELTTTGYIYPVTGNLQMAFIISVQYGTDTNSVCPMQALRNDTSIEDKLDVCVEYSLHGITGRGVFHNCTSVGLRNQRFVYDTFDNLVGYHSYNGNYYCVRPCVSVPVSVIYDKVSNSHATLFGSVACSHVTTMMSQFSRMTKTNLLARTTPGPLQTVVGCAMGFINTSMVVDECQLPLGQSLCAIPPNPSARLARASSGVTDVFQIATLNFTSPLTLAPINSTGFVVAVPTNFTFGVTQEYIETTIQKITVDCKQYVCNGFKKCEELLTEYGQFCSKINQALHGANLRQDESIANLFSSIKTQNTQPLQAGLNGDFNLTMLQIPQVTTGERKYRSAIEDLLFNKVTIADPGYMQGYDECMQQGPQSARDLICAQYVAGYKVLPPLYDPYMEAAYTSSLLGSIAGASWTAGLSSFAAIPFAQSIFYRLNGVGITQQVLSENQKIIANKFNQALGAMQTGFTTTNLAFNKVQDAVNANAMALSKLAAELSNTFGAISSSISDILARLDPPEQEAQIDRLINGRLTSLNAFVAQQLVRTEAAARSAQLAQDKVNECVKSQSKRNGFCGTGTHIVSFAINAPNGLYFFHVGYQPTSHVNATAAYGLCNTENPPKCIAPIGGYFVLNQTTSTVANSEQQWYYTGSSFFHPEPITEVNSKYVSMDVKFENLTNKLPPPLLSNTTDLDFKEELEEFFKNVSSQGPNFQEISKINTTLLNLNTELMVLSEVVKQLNESYIDLKELGNYTFYQKGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGGSGLNDIFEAQKIEWHEGGSHHHHHHHH |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-11-22 Deposition Author(s): Gen, R. , Park, Y.J. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.