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9EG4

Cryo-em structure of the icosahedral capsid of lme-1 phage

PDB DOI: 10.2210/pdb9eg4/pdb

Classification: VIRUS
Organism(s): Legionella Pneumophila

Deposited: 2024-11-20
Deposition Author(s): Deme, J.C. , Lea, S.M.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.1 Å

9eg4
Literature

Cryo-em structure of the icosahedral capsid of lme-1 phage

Deme, J.C. , Lea, S.M.

Primary Citation of Related Structures: 9EG4


Proteins
Molecule Chains Sequence Length Organism Sequence
Phage major capsid protein A 289 Legionella Pneumophila MSLALSQIEIQQFLSEAHAEFQSEGFLLQGAVRTKSGTKGSIVHFPVFGEGMANQKAPQDDITPMNVSNRDAEAVIEDWYASEYADRSFQNKLAVNAVEEYAKLCAWAIGRRADQINIDTIAGATYSATPNDQQGALVPVGTTGFTFEKLRQAHRWLRQRSANRGKRTVIIDAIAEEQLLNVEQLTNSFYVNQKILDNDGLHGMTFLGMNFIVIPSMQEGGLPTTGGGTVGRAFFINEMAVGYAQSERLGGDISWENIKTSYLINMWMEAGAVVIDPKGLVEVDYLLEP
Phage major capsid protein C 289 Legionella Pneumophila MSLALSQIEIQQFLSEAHAEFQSEGFLLQGAVRTKSGTKGSIVHFPVFGEGMANQKAPQDDITPMNVSNRDAEAVIEDWYASEYADRSFQNKLAVNAVEEYAKLCAWAIGRRADQINIDTIAGATYSATPNDQQGALVPVGTTGFTFEKLRQAHRWLRQRSANRGKRTVIIDAIAEEQLLNVEQLTNSFYVNQKILDNDGLHGMTFLGMNFIVIPSMQEGGLPTTGGGTVGRAFFINEMAVGYAQSERLGGDISWENIKTSYLINMWMEAGAVVIDPKGLVEVDYLLEP
Phage major capsid protein E 289 Legionella Pneumophila MSLALSQIEIQQFLSEAHAEFQSEGFLLQGAVRTKSGTKGSIVHFPVFGEGMANQKAPQDDITPMNVSNRDAEAVIEDWYASEYADRSFQNKLAVNAVEEYAKLCAWAIGRRADQINIDTIAGATYSATPNDQQGALVPVGTTGFTFEKLRQAHRWLRQRSANRGKRTVIIDAIAEEQLLNVEQLTNSFYVNQKILDNDGLHGMTFLGMNFIVIPSMQEGGLPTTGGGTVGRAFFINEMAVGYAQSERLGGDISWENIKTSYLINMWMEAGAVVIDPKGLVEVDYLLEP
Phage major capsid protein D 289 Legionella Pneumophila MSLALSQIEIQQFLSEAHAEFQSEGFLLQGAVRTKSGTKGSIVHFPVFGEGMANQKAPQDDITPMNVSNRDAEAVIEDWYASEYADRSFQNKLAVNAVEEYAKLCAWAIGRRADQINIDTIAGATYSATPNDQQGALVPVGTTGFTFEKLRQAHRWLRQRSANRGKRTVIIDAIAEEQLLNVEQLTNSFYVNQKILDNDGLHGMTFLGMNFIVIPSMQEGGLPTTGGGTVGRAFFINEMAVGYAQSERLGGDISWENIKTSYLINMWMEAGAVVIDPKGLVEVDYLLEP
Phage major capsid protein F 289 Legionella Pneumophila MSLALSQIEIQQFLSEAHAEFQSEGFLLQGAVRTKSGTKGSIVHFPVFGEGMANQKAPQDDITPMNVSNRDAEAVIEDWYASEYADRSFQNKLAVNAVEEYAKLCAWAIGRRADQINIDTIAGATYSATPNDQQGALVPVGTTGFTFEKLRQAHRWLRQRSANRGKRTVIIDAIAEEQLLNVEQLTNSFYVNQKILDNDGLHGMTFLGMNFIVIPSMQEGGLPTTGGGTVGRAFFINEMAVGYAQSERLGGDISWENIKTSYLINMWMEAGAVVIDPKGLVEVDYLLEP
Phage major capsid protein B 289 Legionella Pneumophila MSLALSQIEIQQFLSEAHAEFQSEGFLLQGAVRTKSGTKGSIVHFPVFGEGMANQKAPQDDITPMNVSNRDAEAVIEDWYASEYADRSFQNKLAVNAVEEYAKLCAWAIGRRADQINIDTIAGATYSATPNDQQGALVPVGTTGFTFEKLRQAHRWLRQRSANRGKRTVIIDAIAEEQLLNVEQLTNSFYVNQKILDNDGLHGMTFLGMNFIVIPSMQEGGLPTTGGGTVGRAFFINEMAVGYAQSERLGGDISWENIKTSYLINMWMEAGAVVIDPKGLVEVDYLLEP
Phage major capsid protein G 289 Legionella Pneumophila MSLALSQIEIQQFLSEAHAEFQSEGFLLQGAVRTKSGTKGSIVHFPVFGEGMANQKAPQDDITPMNVSNRDAEAVIEDWYASEYADRSFQNKLAVNAVEEYAKLCAWAIGRRADQINIDTIAGATYSATPNDQQGALVPVGTTGFTFEKLRQAHRWLRQRSANRGKRTVIIDAIAEEQLLNVEQLTNSFYVNQKILDNDGLHGMTFLGMNFIVIPSMQEGGLPTTGGGTVGRAFFINEMAVGYAQSERLGGDISWENIKTSYLINMWMEAGAVVIDPKGLVEVDYLLEP
orf16 H 269 Legionella Pneumophila MAFGINYMGRVSTSANNDTQKVWIYNGTATGSNETVATIAASGYFNAFMVNVALGKGPLGVGDLIIINGNDASAFYTVQTITPNVTVSVFAASGVVGTSNIQDGAVTANKLATDSVTTVKILDDNVTSDKIAASVLKYVAVPLTAANIIAMNGAPVQVLAAGGANTVHLVEHACLMMTYGTTQFTGGGAIGLQYGNTAALAGEAASSTIAAANVQGAASTMDMVEGALSSGAFTAVANLGLFISNNTAAFAAGDSDFVLHLWYRTVPTV
orf16 I 269 Legionella Pneumophila MAFGINYMGRVSTSANNDTQKVWIYNGTATGSNETVATIAASGYFNAFMVNVALGKGPLGVGDLIIINGNDASAFYTVQTITPNVTVSVFAASGVVGTSNIQDGAVTANKLATDSVTTVKILDDNVTSDKIAASVLKYVAVPLTAANIIAMNGAPVQVLAAGGANTVHLVEHACLMMTYGTTQFTGGGAIGLQYGNTAALAGEAASSTIAAANVQGAASTMDMVEGALSSGAFTAVANLGLFISNNTAAFAAGDSDFVLHLWYRTVPTV
orf16 J 269 Legionella Pneumophila MAFGINYMGRVSTSANNDTQKVWIYNGTATGSNETVATIAASGYFNAFMVNVALGKGPLGVGDLIIINGNDASAFYTVQTITPNVTVSVFAASGVVGTSNIQDGAVTANKLATDSVTTVKILDDNVTSDKIAASVLKYVAVPLTAANIIAMNGAPVQVLAAGGANTVHLVEHACLMMTYGTTQFTGGGAIGLQYGNTAALAGEAASSTIAAANVQGAASTMDMVEGALSSGAFTAVANLGLFISNNTAAFAAGDSDFVLHLWYRTVPTV
orf16 K 269 Legionella Pneumophila MAFGINYMGRVSTSANNDTQKVWIYNGTATGSNETVATIAASGYFNAFMVNVALGKGPLGVGDLIIINGNDASAFYTVQTITPNVTVSVFAASGVVGTSNIQDGAVTANKLATDSVTTVKILDDNVTSDKIAASVLKYVAVPLTAANIIAMNGAPVQVLAAGGANTVHLVEHACLMMTYGTTQFTGGGAIGLQYGNTAALAGEAASSTIAAANVQGAASTMDMVEGALSSGAFTAVANLGLFISNNTAAFAAGDSDFVLHLWYRTVPTV
orf16 L 269 Legionella Pneumophila MAFGINYMGRVSTSANNDTQKVWIYNGTATGSNETVATIAASGYFNAFMVNVALGKGPLGVGDLIIINGNDASAFYTVQTITPNVTVSVFAASGVVGTSNIQDGAVTANKLATDSVTTVKILDDNVTSDKIAASVLKYVAVPLTAANIIAMNGAPVQVLAAGGANTVHLVEHACLMMTYGTTQFTGGGAIGLQYGNTAALAGEAASSTIAAANVQGAASTMDMVEGALSSGAFTAVANLGLFISNNTAAFAAGDSDFVLHLWYRTVPTV
orf16 M 269 Legionella Pneumophila MAFGINYMGRVSTSANNDTQKVWIYNGTATGSNETVATIAASGYFNAFMVNVALGKGPLGVGDLIIINGNDASAFYTVQTITPNVTVSVFAASGVVGTSNIQDGAVTANKLATDSVTTVKILDDNVTSDKIAASVLKYVAVPLTAANIIAMNGAPVQVLAAGGANTVHLVEHACLMMTYGTTQFTGGGAIGLQYGNTAALAGEAASSTIAAANVQGAASTMDMVEGALSSGAFTAVANLGLFISNNTAAFAAGDSDFVLHLWYRTVPTV
orf16 N 269 Legionella Pneumophila MAFGINYMGRVSTSANNDTQKVWIYNGTATGSNETVATIAASGYFNAFMVNVALGKGPLGVGDLIIINGNDASAFYTVQTITPNVTVSVFAASGVVGTSNIQDGAVTANKLATDSVTTVKILDDNVTSDKIAASVLKYVAVPLTAANIIAMNGAPVQVLAAGGANTVHLVEHACLMMTYGTTQFTGGGAIGLQYGNTAALAGEAASSTIAAANVQGAASTMDMVEGALSSGAFTAVANLGLFISNNTAAFAAGDSDFVLHLWYRTVPTV
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-11-20
Deposition Author(s): Deme, J.C. , Lea, S.M.