H5n1 ha in complex with hc-5 fab
PDB DOI: 10.2210/pdb9ebc/pdb
Classification: VIRAL PROTEIN/IMMUNE SYSTEM Organism(s): Influenza A Virus , Mus Musculus
Deposited: 2024-11-12 Deposition Author(s): Liang, B. , Salas, E.
Method: ELECTRON MICROSCOPY Resolution: 2.87 Å
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Hemagglutinin HA1 | A | 317 | Influenza A Virus , Mus Musculus | DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHMLSRINHFEKILIIPKSSWPNHETSLGVSAACPYQGAPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPTTYISVGTSTLNQRLAPKIATRSQVNGQRGRMDFFWTILKPDDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGL |
| Hemagglutinin HA1 | C | 317 | Influenza A Virus , Mus Musculus | DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHMLSRINHFEKILIIPKSSWPNHETSLGVSAACPYQGAPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPTTYISVGTSTLNQRLAPKIATRSQVNGQRGRMDFFWTILKPDDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGL |
| Hemagglutinin HA1 | E | 317 | Influenza A Virus , Mus Musculus | DQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLCDLNGVKPLILKDCSVAGWLLGNPMCDEFIRVPEWSYIVERANPANDLCYPGSLNDYEELKHMLSRINHFEKILIIPKSSWPNHETSLGVSAACPYQGAPSFFRNVVWLIKKNDAYPTIKISYNNTNREDLLILWGIHHSNNAEEQTNLYKNPTTYISVGTSTLNQRLAPKIATRSQVNGQRGRMDFFWTILKPDDAIHFESNGNFIAPEYAYKIVKKGDSTIMKSGVEYGHCNTKCQTPVGAINSSMPFHNIHPLTIGECPKYVKSNKLVLATGL |
| Hemagglutinin HA2 | B | 149 | Influenza A Virus , Mus Musculus | WQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQY |
| Hemagglutinin HA2 | D | 149 | Influenza A Virus , Mus Musculus | WQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQY |
| Hemagglutinin HA2 | F | 149 | Influenza A Virus , Mus Musculus | WQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQFEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQY |
| HC-5 Fab heavy chain | G | 127 | Influenza A Virus , Mus Musculus | VQLLESGGGLVQSGGSLRLSCAASGFTFSSCALSWVRQAPGKGLEWVSGIRGSGDTTYYADSVRGRFTISRVNSKNSLYLQMNSLRAEDTAVYFCAKTPYDFWNTYYPYSYYYYMDVWGKGTTVTVS |
| HC-5 Fab heavy chain | I | 127 | Influenza A Virus , Mus Musculus | VQLLESGGGLVQSGGSLRLSCAASGFTFSSCALSWVRQAPGKGLEWVSGIRGSGDTTYYADSVRGRFTISRVNSKNSLYLQMNSLRAEDTAVYFCAKTPYDFWNTYYPYSYYYYMDVWGKGTTVTVS |
| HC-5 Fab heavy chain | K | 127 | Influenza A Virus , Mus Musculus | VQLLESGGGLVQSGGSLRLSCAASGFTFSSCALSWVRQAPGKGLEWVSGIRGSGDTTYYADSVRGRFTISRVNSKNSLYLQMNSLRAEDTAVYFCAKTPYDFWNTYYPYSYYYYMDVWGKGTTVTVS |
| HC-5 Fab light chain | H | 112 | Influenza A Virus , Mus Musculus | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGAYYCMQGIHLPLTFGGGTKVEIK |
| HC-5 Fab light chain | J | 112 | Influenza A Virus , Mus Musculus | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGAYYCMQGIHLPLTFGGGTKVEIK |
| HC-5 Fab light chain | L | 112 | Influenza A Virus , Mus Musculus | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSDGKTYLYWYLQKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGAYYCMQGIHLPLTFGGGTKVEIK |
Method: ELECTRON MICROSCOPY