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9E0O

Cryoem structure of inducible lysine decarboxylase from hafnia alvei l-hydrazino-lysine analog at 2.04 angstrom resolution

PDB DOI: 10.2210/pdb9e0o/pdb

Classification: LYASE
Organism(s): Hafnia Alvei Atcc 51873

Deposited: 2024-10-18
Deposition Author(s): Berkowitz, D.B. , Desfosses, A. , Doukov, T.I. , Duhoo, Y. , Gutsche, I.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.0 Å

Literature

Cryoem structure of inducible lysine decarboxylase from hafnia alvei l-hydrazino-lysine analog at 2.04 angstrom resolution

Berkowitz, D.B. , Desfosses, A. , Doukov, T.I. , Duhoo, Y. , Gutsche, I.

Primary Citation of Related Structures: 9E0O


Proteins
Molecule Chains Sequence Length Organism Sequence
Lysine decarboxylase, inducible A 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible B 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible C 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible D 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible E 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible F 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible G 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible H 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible I 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Lysine decarboxylase, inducible J 710 Hafnia Alvei Atcc 51873 MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-10-18
Deposition Author(s): Berkowitz, D.B. , Desfosses, A. , Doukov, T.I. , Duhoo, Y. , Gutsche, I.