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FASTA Sequence PDB Format mmCIF Format
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9DXH

Attpmm and attbmm bound serine integrase complex in the pre-rotation state

PDB DOI: 10.2210/pdb9dxh/pdb

Classification: DNA BINDING PROTEIN
Organism(s): Bacillus Subtilis , Synthetic Construct

Deposited: 2024-10-11
Deposition Author(s): Olorunniji, F.J. , Rice, P.A. , Shin, H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.69 Å

9dxh
Literature

Attpmm and attbmm bound serine integrase complex in the pre-rotation state

Olorunniji, F.J. , Rice, P.A. , Shin, H.

Primary Citation of Related Structures: 9DXH


Proteins
Molecule Chains Sequence Length Organism Sequence
Resolvase homolog YokA A 545 Bacillus Subtilis , Synthetic Construct MELKNIVNSYNITNILGYLRRSRQDMEREKRTGEDTLTEQKELMNKILTAIEIPYELKMEIGSGESIDGRPVFKECLKDLEEGKYQAIAVKEITRLSRGSYSDAGQIVNLLQSKRLIIITPYKVYDPRNPVDMRQIRFELFMAREEFEMTRERMTGAKYTYAAQGKWISGLAPYGYQLNKKTSKLDPVEDEAKVVQLIFNIFLNGLNGKDYSYTAIASHLTNLQIPTPSGKKRWNQYTIKAILQNEVYIGTVKYKVREKTKDGKRTIRPEKEQIVVQDAHAPIIDKEQFQQSQVKIANKVPLLPNKDEFELSELAGVCTCSKCGEPLSKYESKRIRKNKDGTESVYHVKSLTCKKNKCTYVRYNDVENAILDYLSSLNDLNDSTLTKHINSMLSKYEDDNSNMKTKKQMSEHLSQKEKELKNKENFIFDKYESGIYSDELFLKRKAALDEEFKELQNAKNELNGLQDTQSEIDSNTVRNNINKIIDQYHIESSSEKKNELLRMVLKDVIVNMTQKRKGPIPAQFEITPILRFNFIFDLTATNSFH
Resolvase homolog YokA C 545 Bacillus Subtilis , Synthetic Construct MELKNIVNSYNITNILGYLRRSRQDMEREKRTGEDTLTEQKELMNKILTAIEIPYELKMEIGSGESIDGRPVFKECLKDLEEGKYQAIAVKEITRLSRGSYSDAGQIVNLLQSKRLIIITPYKVYDPRNPVDMRQIRFELFMAREEFEMTRERMTGAKYTYAAQGKWISGLAPYGYQLNKKTSKLDPVEDEAKVVQLIFNIFLNGLNGKDYSYTAIASHLTNLQIPTPSGKKRWNQYTIKAILQNEVYIGTVKYKVREKTKDGKRTIRPEKEQIVVQDAHAPIIDKEQFQQSQVKIANKVPLLPNKDEFELSELAGVCTCSKCGEPLSKYESKRIRKNKDGTESVYHVKSLTCKKNKCTYVRYNDVENAILDYLSSLNDLNDSTLTKHINSMLSKYEDDNSNMKTKKQMSEHLSQKEKELKNKENFIFDKYESGIYSDELFLKRKAALDEEFKELQNAKNELNGLQDTQSEIDSNTVRNNINKIIDQYHIESSSEKKNELLRMVLKDVIVNMTQKRKGPIPAQFEITPILRFNFIFDLTATNSFH
Resolvase homolog YokA I 545 Bacillus Subtilis , Synthetic Construct MELKNIVNSYNITNILGYLRRSRQDMEREKRTGEDTLTEQKELMNKILTAIEIPYELKMEIGSGESIDGRPVFKECLKDLEEGKYQAIAVKEITRLSRGSYSDAGQIVNLLQSKRLIIITPYKVYDPRNPVDMRQIRFELFMAREEFEMTRERMTGAKYTYAAQGKWISGLAPYGYQLNKKTSKLDPVEDEAKVVQLIFNIFLNGLNGKDYSYTAIASHLTNLQIPTPSGKKRWNQYTIKAILQNEVYIGTVKYKVREKTKDGKRTIRPEKEQIVVQDAHAPIIDKEQFQQSQVKIANKVPLLPNKDEFELSELAGVCTCSKCGEPLSKYESKRIRKNKDGTESVYHVKSLTCKKNKCTYVRYNDVENAILDYLSSLNDLNDSTLTKHINSMLSKYEDDNSNMKTKKQMSEHLSQKEKELKNKENFIFDKYESGIYSDELFLKRKAALDEEFKELQNAKNELNGLQDTQSEIDSNTVRNNINKIIDQYHIESSSEKKNELLRMVLKDVIVNMTQKRKGPIPAQFEITPILRFNFIFDLTATNSFH
Resolvase homolog YokA K 545 Bacillus Subtilis , Synthetic Construct MELKNIVNSYNITNILGYLRRSRQDMEREKRTGEDTLTEQKELMNKILTAIEIPYELKMEIGSGESIDGRPVFKECLKDLEEGKYQAIAVKEITRLSRGSYSDAGQIVNLLQSKRLIIITPYKVYDPRNPVDMRQIRFELFMAREEFEMTRERMTGAKYTYAAQGKWISGLAPYGYQLNKKTSKLDPVEDEAKVVQLIFNIFLNGLNGKDYSYTAIASHLTNLQIPTPSGKKRWNQYTIKAILQNEVYIGTVKYKVREKTKDGKRTIRPEKEQIVVQDAHAPIIDKEQFQQSQVKIANKVPLLPNKDEFELSELAGVCTCSKCGEPLSKYESKRIRKNKDGTESVYHVKSLTCKKNKCTYVRYNDVENAILDYLSSLNDLNDSTLTKHINSMLSKYEDDNSNMKTKKQMSEHLSQKEKELKNKENFIFDKYESGIYSDELFLKRKAALDEEFKELQNAKNELNGLQDTQSEIDSNTVRNNINKIIDQYHIESSSEKKNELLRMVLKDVIVNMTQKRKGPIPAQFEITPILRFNFIFDLTATNSFH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (34-MER) e 34 NA TTTTTTTTGTAGTAAGTATCTTAATATACAGCTT
DNA (34-MER) m 34 NA TTTTTTTTGTAGTAAGTATCTTAATATACAGCTT
DNA (33-MER) f 33 NA AGCTGTATATTAAGATACTTACTACAAAAAAAA
DNA (33-MER) n 33 NA AGCTGTATATTAAGATACTTACTACAAAAAAAA
DNA (25-MER) g 25 NA CATGTCATTAATATCAGTACAGATT
DNA (25-MER) o 25 NA CATGTCATTAATATCAGTACAGATT
DNA (24-MER) h 24 NA ATCTGTACTGATATTAATGACATG
DNA (24-MER) p 24 NA ATCTGTACTGATATTAATGACATG
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-10-11
Deposition Author(s): Olorunniji, F.J. , Rice, P.A. , Shin, H.