9DP3
Ape1 n174d product complex with abasic dna
PDB DOI: 10.2210/pdb9dp3/pdb
Classification: HYDROLASE/DNA Organism(s): Homo Sapiens , Synthetic Construct
Deposited: 2024-09-20 Deposition Author(s): Dehart, K.D. , Freudenthal, B.D. , Hoitsma, N.M.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.1 Å
Ape1 n174d product complex with abasic dna
Dehart, K.D. , Freudenthal, B.D. , Hoitsma, N.M.
Primary Citation of Related Structures: 9DP3
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA repair nuclease/redox regulator APEX1, mitochondrial | A | 276 | Homo Sapiens , Synthetic Construct | ALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQAPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPDAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
| DNA repair nuclease/redox regulator APEX1, mitochondrial | B | 276 | Homo Sapiens , Synthetic Construct | ALYEDPPDQKTSPSGKPATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSAPSDKEGYSGVGLLSRQAPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPDAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| DNA (5'-D(P*(3DR)P*CP*GP*AP*CP*GP*GP*AP*TP*CP*C)-3') | d | 11 | NA | NCGACGGATCC |
| DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') | e | 10 | NA | GCTGATGCGC |
| DNA (5'-D(*GP*GP*AP*TP*CP*CP*GP*TP*CP*GP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') | f | 21 | NA | GGATCCGTCGGGCGCATCAGC |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2024-09-20 Deposition Author(s): Dehart, K.D. , Freudenthal, B.D. , Hoitsma, N.M.