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9DN4

Crystal structure of a sars-cov-2 20-mer rna in complex with fab bl3-6s97n

PDB DOI: 10.2210/pdb9dn4/pdb

Classification: IMMUNE SYSTEM
Organism(s): Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2024-09-16
Deposition Author(s): Battaile, K.P. , Cooper, A. , Hegde, S. , Lovell, S. , Wang, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.9 Å

9dn4
Literature

Crystal structure of a sars-cov-2 20-mer rna in complex with fab bl3-6s97n

Battaile, K.P. , Cooper, A. , Hegde, S. , Lovell, S. , Wang, J.

Primary Citation of Related Structures: 9DN4


Proteins
Molecule Chains Sequence Length Organism Sequence
FAB BL3-6S97N HEAVY CHAIN A 250 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGWSCIILFLVATATGVHSEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
FAB BL3-6S97N HEAVY CHAIN D 250 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGWSCIILFLVATATGVHSEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
FAB BL3-6S97N LIGHT CHAIN B 233 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGWSCIILFLVATATGVHSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
FAB BL3-6S97N LIGHT CHAIN C 233 Enterobacter Aerogenes , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MGWSCIILFLVATATGVHSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*CP*UP*CP*GP*UP*CP*UP*GP*AP*AP*AP*CP*AP*CP*GP*GP*AP*GP*AP*G)-3') e 20 NA CUCGUCUGAAACACGGAGAG
RNA (5'-R(P*CP*UP*CP*GP*UP*CP*UP*GP*AP*AP*AP*CP*AP*CP*GP*GP*AP*GP*AP*G)-3') f 20 NA CUCGUCUGAAACACGGAGAG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2024-09-16
Deposition Author(s): Battaile, K.P. , Cooper, A. , Hegde, S. , Lovell, S. , Wang, J.