9DF0
Pdcov s rbd bound to pd41 fab (local refinement)
PDB DOI: 10.2210/pdb9df0/pdb
Classification: VIRAL PROTEIN Organism(s): Mus Musculus , Porcine Deltacoronavirus
Deposited: 2024-08-29 Deposition Author(s): Asarnow, D. , Rexhepaj, M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 2.8 Å
Pdcov s rbd bound to pd41 fab (local refinement)
Asarnow, D. , Rexhepaj, M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.
Primary Citation of Related Structures: 9DF0
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Spike glycoprotein | A | 1166 | Mus Musculus , Porcine Deltacoronavirus | MQRALLIMTLLCLVRAKFADDLLDLLTFPGAHRFLHKLTSNSSSLYSRANNFDVGVLPGYPTKNVNLFSPLTNSTLPINGLHRSYQPLMLNCLTKITNHTLSMYLLPSEIQTYSCGGAMVKYQTHDAVRIILDLTVTDHISVEVVGQHGENYVFVCSEQFNYTTALHNSTFFSLNSELYCFTNNTYLGILPPDLTDFTVYRTGQFYANGYLLGTLPITVNYVRLYRGHLSANSAHFALANLTDTLITLTNTTISQITYCDKSVVDSIACQRSSHEVEDGFYSDPKSAVRARQRTIVTLPKLPELEVVQLNISAHMDFGEARLDSVTINGNTSYCVTKPYFRLETNFMCTGCTINLRTDTCSFDLSAVNNGMSFSQFCLSTESGACEMKIVVTYVWKYLLRQRLYVTAVEGQTHTGTTSVHAIDTSSVITDVCTDYTIYGVSGTGIIKPSDLLLHNGIAFTSPTGELYAFKNITTGKTLQVLPCETPSQLIVINNTVVGAITSSNSTENNRFTTTIVTPTFFYSTNATTFNCTKPVLSYGPISVCSDGAIVGTSTLQNTRPSIVSLYDGEVEIPSAFSLSVQTEYLQVQAEQVIVDCPQYVCNGNSRCLQLLAQYTSACSNIEAALHSSAQLDSREIINMFQTSTQSLQLANITNFKGDYNFSSILTTRLGGRSAIEDLLFNKVVTSGLGTVDQDYKACSRDMAIADLVCSQYYNGIMVLPGVVDAEKMAMYTGSLTGAMVFGGLTAAAAIPFATAVQARLNYVALQTNVLQENQKILAESFNQAVGNISLALSSVNDAIQQTSEALNTVAIAIKKIQTVVNQQGEALSHLTAQLSNNFQAISTSIQDIYNRLEEVEANQQVDRLITGRLAALNAYVTQLLNQMSQIRQSRLLAQQKINECVKSQSSRYGFCGNGTHIFSLTQTAPNGIFFMHAVLVPNKFTRVNASAGICVDNTRGYSLQPQLILYQFNNSWRVTPRNMYEPRLPRQADFIQLTDCSVTFYNTTAANLPNIIPDIIDVNQTVSDIIDNLPTATPPQWDVGIYNNTILNLTVEINDLQERSKNLSQIADRLQNYIDNLNNTLVDLEWLNRVETYLKWPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLGRSLEVLFQGPGSGGLNDIFEAQKIEWHEGSGHHHHHHHH |
| PD41 Fab variable heavy-chain | H | 118 | Mus Musculus , Porcine Deltacoronavirus | HSQLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS |
| PD41 Fab variable light-chain | L | 111 | Mus Musculus , Porcine Deltacoronavirus | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAGYTTYVVFGGGTQLTVL |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2024-08-29 Deposition Author(s): Asarnow, D. , Rexhepaj, M. , Seattle Structural Genomics Center For Infectious Disease (Ssgcid) , Veesler, D.