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9D85

Structure of the keops complex (cgi121/bud32/kae1/pcc1) bound to trna in a distorted trna conformation

PDB DOI: 10.2210/pdb9d85/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638

Deposited: 2024-08-18
Deposition Author(s): Beenstock, J. , Daou, S. , Keszei, A.F.A. , Ona Chuquimarca, S.M. , Sicheri, F. , Yin, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.59 Å

Literature

Structure of the keops complex (cgi121/bud32/kae1/pcc1) bound to trna in a distorted trna conformation

Beenstock, J. , Daou, S. , Keszei, A.F.A. , Ona Chuquimarca, S.M. , Sicheri, F. , Yin, Z.

Primary Citation of Related Structures: 9D85


Proteins
Molecule Chains Sequence Length Organism Sequence
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein B 203 Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638 KIPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDRDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYVE
Regulatory protein Cgi121 C 148 Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638 MDPMIIRGIRGARINNEIFNLGLKFQILNADVVATKKHVLHAINQAKTKKPIAKSFWMEILVRASGQRQIHEAIKIIGAKDGNVCLICEDEETFRKIYELIGGEIDDSVLEINEDKERLIREIFKIRGFGNVVERVLEKIALIELKKE
Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein K 327 Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638 MDPMICLGLEGTAEKTGVGIVTSDGEVLFNKTIMYKPPKQGINPREAADHHAETFPKLIKEAFEVVDKNEIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGVNHCIAHIEIGKLTTEAEDPLTLYVSGGNTQVIAYVSKKYRVFGETLDIAVGNCLDQFARYVNLPHPGGPYIEELARKGKKLVDLPYTVKGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCGDNGAMIAWLGLLMHKNGRWMSLDETKIIPNYRTDMVEVNWI
KEOPS complex subunit Pcc1 P 82 Methanocaldococcus Jannaschii , Pyrococcus Furiosus Dsm 3638 MKAKRVQAKIEIEFPSEDVAKVVYEAVLYEHLSVPYRRSEIDFKLEGKKIILDIKATDSSALRGTVNSYLRWIKAAIDVIEV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
tRNA t 76 NA GGCCCGUAGCUCAGUCUGGCAGAGCGCCUGGCUUUUAACCAGGUGGUCGAGGGUUCAAAUCCCUUCGGGCCCGCCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-18
Deposition Author(s): Beenstock, J. , Daou, S. , Keszei, A.F.A. , Ona Chuquimarca, S.M. , Sicheri, F. , Yin, Z.