PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9D83

Shigella flexneri bacteriophage b2 tail

PDB DOI: 10.2210/pdb9d83/pdb

Classification: VIRUS
Organism(s): Shigella Phage B2

Deposited: 2024-08-18
Deposition Author(s): Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.5 Å

9d83
Literature

Shigella flexneri bacteriophage b2 tail

Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.

Primary Citation of Related Structures: 9D83


Proteins
Molecule Chains Sequence Length Organism Sequence
Portal Protein Gp39 A 706 Shigella Phage B2 MAKDELPIVNPEETGNLTDWDNEPTVSDLKSDYDSAYSSHSAQMSQITTWLNNLNVEGSAKPKKVPGRSSVQPMLIRKQAEWRYSALTEPFLSTDELFAVSPVTWEDREAAIQNQLVLNYQFNIKIDKVRFIDDYVRNAVNEGTVIVRVGWCNYTQMVKETVPVYAYYPAANEDQVAALQEALQLKLENPNAYNSLPDDIIASVDYSFENRGAFVAVQTGTEEVEYEKVIKNQPTVEVVNSQNVVIDPTCNGDISQAQFVIYSFETSKSDLEKDGRYKNLDKISASMSNPLNTPDHQVEDQSGFNFKDEPRKKFVAYEYWGWWDINGNGKTVPIVATFVGNTMIRLEENPFPDKKIPFVVVPYLPVPRSIYGEPDGALLEDNQKIIGATTRAMIDILARSANGQTGIRKDMLDVTNRRKFDKGEDYEFNANVDPRQGIYMHVSPEIPQSAPMMIQYQNNEAESLTGVKSFSQGIASQALGDVAAGIRGALDAASKRELGILRRLAQGVVEIGRKIISMNSEFLSEEEVVRVTNEQFVTVRRDELAGEFDLKLSISTAEADNQKAQELAFMLQTMGNSLPFEMSQMVLSDIARLRNMPDLAKRIESYQPQPDPLAQRKAELEIALLEAQIAETQSKAIENRASAGYKATQAQNVQSDTDLKNLDYVEQESGVKQARDVQKISAQAESQTQTKIVDYILKSGKPLSEI
Head to tail adaptor Gp50 B 234 Shigella Phage B2 MKLSELFQMLSVGELSLIRTGNDGQGIRTQDYPKVIAQLNAGLTNLHARFPLLEKEVIIQQYEQISKYYLRSEFAQMNTTSTEKYKYLMDSPTERFLDDVIRVERVFDECGCPLYLNNEPCCGSIVTPSFDCIQIVYPIETNALFVTYRANHPKIALTTTDLNTEVRIPASHEKALTYYIASQLYSNSPNPETAAKGVEWSQRFEAECTKIENLDLDNAHIAQTNVKPEMRGWV
Gp34 C 206 Shigella Phage B2 MAVVIEPITNEDLTTKVVDGTGIFDELMTAANAHLSAQWDMERITGTQYAEVYLGQLTAVLQQAVTFLIEKDKTYLNNLLINAQIELANKQIELADKELEKADKEIELLELNKELIAQKVKTEKAQISDTVDSVPVTGIIGAQIALYKQQKDGFIRDAEQKALKIISDTWITRKTVDDGTPLPTGFDTAAVDAFTRKVADGVSVNY
Gp49 D 410 Shigella Phage B2 MIRTTNTCCGNQAGMVEKFIGTAYDVVKTVYDNLGEIQFIYNFLNDYGVLITVDSVTELQELPTTAKYTRVYSSTPTGVRIYTDYLYVEGDRTGVLPSDPTATGSWVVVGSSNSGAATGTGAYIPFVFNNGSAAGGETTIVVPDYTIGVPEIYVEGFRQQVGRGFTFNSVNLTVTLAQPLEQGDEVVLMLSGNPAVPDNPNIDSWTVINWIYNNGAAVGGEQVIVIPYTFQTVPAIFKNGLRYQGGLSTQSYTVDQDNKRILLTEPLSTNDRLVVQLGGELVTLESPDRSLYEIARATNMKDSEVIKSDNTVETLNGKRILYDIVSQVYYWIPSSVPNNVYIQSVVNGQLTYLPGNIVVTLTPIVTLGLSGTTAQRPIGVLTGTQHFDTTLGKPIWFNGTAWVDSTGAVV
Gp49 E 410 Shigella Phage B2 MIRTTNTCCGNQAGMVEKFIGTAYDVVKTVYDNLGEIQFIYNFLNDYGVLITVDSVTELQELPTTAKYTRVYSSTPTGVRIYTDYLYVEGDRTGVLPSDPTATGSWVVVGSSNSGAATGTGAYIPFVFNNGSAAGGETTIVVPDYTIGVPEIYVEGFRQQVGRGFTFNSVNLTVTLAQPLEQGDEVVLMLSGNPAVPDNPNIDSWTVINWIYNNGAAVGGEQVIVIPYTFQTVPAIFKNGLRYQGGLSTQSYTVDQDNKRILLTEPLSTNDRLVVQLGGELVTLESPDRSLYEIARATNMKDSEVIKSDNTVETLNGKRILYDIVSQVYYWIPSSVPNNVYIQSVVNGQLTYLPGNIVVTLTPIVTLGLSGTTAQRPIGVLTGTQHFDTTLGKPIWFNGTAWVDSTGAVV
Gp49 F 410 Shigella Phage B2 MIRTTNTCCGNQAGMVEKFIGTAYDVVKTVYDNLGEIQFIYNFLNDYGVLITVDSVTELQELPTTAKYTRVYSSTPTGVRIYTDYLYVEGDRTGVLPSDPTATGSWVVVGSSNSGAATGTGAYIPFVFNNGSAAGGETTIVVPDYTIGVPEIYVEGFRQQVGRGFTFNSVNLTVTLAQPLEQGDEVVLMLSGNPAVPDNPNIDSWTVINWIYNNGAAVGGEQVIVIPYTFQTVPAIFKNGLRYQGGLSTQSYTVDQDNKRILLTEPLSTNDRLVVQLGGELVTLESPDRSLYEIARATNMKDSEVIKSDNTVETLNGKRILYDIVSQVYYWIPSSVPNNVYIQSVVNGQLTYLPGNIVVTLTPIVTLGLSGTTAQRPIGVLTGTQHFDTTLGKPIWFNGTAWVDSTGAVV
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-18
Deposition Author(s): Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.