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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9D82

Shigella flexneri bacteriophage b2 icosahedral reconstruction

PDB DOI: 10.2210/pdb9d82/pdb

Classification: VIRUS
Organism(s): Shigella Phage B2

Deposited: 2024-08-18
Deposition Author(s): Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.3 Å

9d82
Literature

Shigella flexneri bacteriophage b2 icosahedral reconstruction

Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.

Primary Citation of Related Structures: 9D82


Proteins
Molecule Chains Sequence Length Organism Sequence
B2 Capsid A 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Capsid B 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Capsid C 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Capsid D 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Capsid E 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Capsid F 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Capsid G 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Capsid H 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Capsid I 389 Shigella Phage B2 MKYNAPNTTPSSIGPQIRLDYYYKKALVDAAKEMYFGQLAEVTNMPKNMGKQIKLYHYVPLLDDRNVNDQGIDAAGATIANGNLYGSSKDIGTIPSKLPALTENGGRVNRVGFTRIQLIGSIKKFGFFYEWTQEAMDFDTDEELDSHLIQEAVKGANEITEDQLQIDLLNGAGVVRYPGAATSNADMTGEGTATVVTYEGLVKMGITLNDNLCPMQTKLIAGSLMTDTRTIQGARALYIGSELELQLRKMKDPFDNAAFIPVQQYADAGNLLKGEIGSIASFRVIVVPKMLKWAGAGATVTTNPGYYATSGKYDVFPMLCVGSGSFTTIGFQTDGKTVKFTTYTKKPGIETVSYADPYGEMGLTSIKWYYGSLILRPEWIALFKTVAAM
B2 Dec Gp45 J 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
B2 Dec Gp45 K 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
B2 Dec Gp45 L 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
B2 Dec Gp45 M 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
B2 Dec Gp45 N 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
B2 Dec Gp45 O 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
B2 Dec Gp45 P 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
B2 Dec Gp45 Q 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
B2 Dec Gp45 R 99 Shigella Phage B2 MAYSDVDAILADGKQAVAVKHGGGLVVVGELGAQVLAAKDVSELPDGVGGTAPGAATTTTAGVVKQSTTQAASVATDVAGVVTDLNALITKLKAAGIMA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-18
Deposition Author(s): Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.