PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

9D80

Shigella flexneri bacteriophage moo19 tail

PDB DOI: 10.2210/pdb9d80/pdb

Classification: VIRUS
Organism(s): Shigella Virus Moo19

Deposited: 2024-08-18
Deposition Author(s): Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.7 Å

9d80
Literature

Shigella flexneri bacteriophage moo19 tail

Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.

Primary Citation of Related Structures: 9D80


Proteins
Molecule Chains Sequence Length Organism Sequence
Portal protein A 760 Shigella Virus Moo19 MEHQDSMTPLPDPGQSDKLTNWKKEPSIQTLKADLEAGKPAHDAIMKEIQKWNDLMKAEGSAKPPKVKGRSQVQPKLVRRQAEWRYAPLSEPFLSSPKLFKLTPVTWEDEQAARQNELVLNYQFRTQLNRVKLVDDYVHSVCDDGTGIARVGWERKVVKVKQDAPVFQMYPVETEEQVQILQQALDLQAQNPRGYEEQVADDVKEAVNYFNETGEATYAIQTGTTEVEVEKAVVNRPTVEMLDPNNVVIDPSCNGDLDRALFAVVSFETCKADLLKTPDRYHNLDKIDWESSSPLTDPDHESKTPGDFQFRDAMRKRVIAYEYWGFWDTNGDGELKPIVATWIGTTLIRMEENPYPDGKLPFVLVPYMPRKRELYGEADAELLGDNQKILGATMRGMIDLLGRSANGQRAYPKGMLDTLNRRRFEDGLDYEYNPQTGNPSQAIIEHKFPELPQSAIVMSQMQNQEAEALTGVKAFAGGVTGSAYGDVAAGIRGALDAASKREMAILRRLAKGMADIGTKICAMNAVFLSETEVVRITNEEYVTINREDLKGNFDIEVDINTAEVDNQKSQDLGFMVQTIGNTVDQQVTLKLVARIAELKRMPELAHELRTWKPEPDPMEEQLKQLAIQKAQLENQKLQSEIALNEAKVRAEDAKKDMTNLDYLEQESGTKHAREMEKQKAQSQGNQNLQVTKALTQPVKEGETSPNISAAIGYNAITDGNNQVNNELERDALAPQDPSLSIGSQYFDPSRDPALSPGMNL
Gp83 B 234 Shigella Virus Moo19 MRKLSDVYKVLALTSLKSAGFITDDKVNIEAWGKPEVLAHINEGLTRLHSRFVLRTNNCIVEMKEGRTDYPLLARYSYERFDPAKAPYPYIMDTPQEPFQEDVIKILNVYDSKGIRRKLNDDHDKNGLFTPRPDVLQCMWPRHFEALNVLYQAKHPELTGDENQEIDLPETLYSALENWVGYRYHTGLNTEGSTAKAAEYLQLYESICGEVVDFDLANGSMSNTNVLFEKRGWV
Tail protein C 279 Shigella Virus Moo19 MSCGAEVEANRLLLALTEGEDFALPDIDMSGPEWDIPGGDGSPIFAEVTRLTNEDLTTRVVGGSGTFDALMASAAAHLKQEFKEGRITGGEYTKAYIAIVETCMGNATQYLLGRDQAYWAAAMAQIQAVSARVALATSKAQYVLAKFQALNAKSEYALTKLKLSTESETYCAALFNVEQTLPQQLKLLIEQTEAQRAQTLDKRSDGATVSGSIGKQKELYTQQITSYQRDAEVKASKLFTDAWITQKTIDEGLTPPNGFTNSSIDDVLTTLKRNNNLNG
Tail fiber protein D 1086 Shigella Virus Moo19 MGMNSHIPFDADNDWTLDPYHCNRSNDPLVDKVIGNAYAVVRAVYCNLGNLKLLYDFLNTYGMVLGVKSEAELKKLNKLAKYARVYGFADTGDRQVTDYLYVPDDTSGIRPDDQTATGSWIKVSTSGSGSGGTGGGSGSYIPYVYANGSALGGETSFKVPAEALGVPFIIINGSVQYIGYGFSFNPANSTVTLSNPLVQGDEVIALTSAAPASPDNPNVSNWVQVNWLYNNGAAVGGEQVITVPYNFKDVPAVYKNGERYYKNLQTKSYVYDPSTRTVTMTELLAQGDRVIITLGGESASLEITDRTTQEVARANNVKDTDVVLSSSTNVVITDKKVLYDVNAQKYWDLPNLPPNVYIVKVEGNKLIYNPGAVVIDLLEPANPLVIVEPVLSRLGAETGNPMAGTFEKGATVDSAAKSVGSTMEGKLYRWEGALPKTVRAGDTPSSSGGIGSGKWVEITNATLRSQLASTGGAAMVKASDGRTVEQWLVQSDSASFRAKNMAKLAWCDYQVHNRGSLKCCFLGDSMTAGFDRTSSDTIPAQDGDWATRASMNYPYRFASYLPEQSGCSVYITMRAISGYTAKQAYEEALWQSNPNCDIVFIMYAINDSGGVAGATLDLYMEYMEKLIRRYIDWGCAVVVQRPSGGGQGAGNPAWLHWAKRMQMVARVYGCPVFDAHEVMLNRHYAAVQSDGTHYNSMGYAIHGEKLASMLMAGGLLDTYKPVVNETTVWTGMMSDHIGWCDARGNIGTGRSDGAYTRDKVTGVLQAGKATICTFSFYLDAEAAHIYGKLDGLINTIYTNGYWWNNGNKPYYQYAVDIDNSFGASLQRVNKSANNYEGMPGSRKFVGRLIGRGWHTITLFTNLQGEALKDAFVNSITVQPIPIGLSTEQMWGQDEERRYRVVHTRRMPSPSGQGGTLPVAVALTGFQMRAPQSFLGTGPGTNAVPAPYFYNTVPGKLKVYNEKGDYIEWLVYKDGSSGLKWKGKVLTHSFADVASVPTLTAYMGTAKQNVIVAAGSSGANQPLENIYDYNAGLQEQTGNPSTDLSWKGGIYLVFTLAWPSTAPTGYWTIELEGSDWFGNSESAVGCF
Tail fiber protein E 1086 Shigella Virus Moo19 MGMNSHIPFDADNDWTLDPYHCNRSNDPLVDKVIGNAYAVVRAVYCNLGNLKLLYDFLNTYGMVLGVKSEAELKKLNKLAKYARVYGFADTGDRQVTDYLYVPDDTSGIRPDDQTATGSWIKVSTSGSGSGGTGGGSGSYIPYVYANGSALGGETSFKVPAEALGVPFIIINGSVQYIGYGFSFNPANSTVTLSNPLVQGDEVIALTSAAPASPDNPNVSNWVQVNWLYNNGAAVGGEQVITVPYNFKDVPAVYKNGERYYKNLQTKSYVYDPSTRTVTMTELLAQGDRVIITLGGESASLEITDRTTQEVARANNVKDTDVVLSSSTNVVITDKKVLYDVNAQKYWDLPNLPPNVYIVKVEGNKLIYNPGAVVIDLLEPANPLVIVEPVLSRLGAETGNPMAGTFEKGATVDSAAKSVGSTMEGKLYRWEGALPKTVRAGDTPSSSGGIGSGKWVEITNATLRSQLASTGGAAMVKASDGRTVEQWLVQSDSASFRAKNMAKLAWCDYQVHNRGSLKCCFLGDSMTAGFDRTSSDTIPAQDGDWATRASMNYPYRFASYLPEQSGCSVYITMRAISGYTAKQAYEEALWQSNPNCDIVFIMYAINDSGGVAGATLDLYMEYMEKLIRRYIDWGCAVVVQRPSGGGQGAGNPAWLHWAKRMQMVARVYGCPVFDAHEVMLNRHYAAVQSDGTHYNSMGYAIHGEKLASMLMAGGLLDTYKPVVNETTVWTGMMSDHIGWCDARGNIGTGRSDGAYTRDKVTGVLQAGKATICTFSFYLDAEAAHIYGKLDGLINTIYTNGYWWNNGNKPYYQYAVDIDNSFGASLQRVNKSANNYEGMPGSRKFVGRLIGRGWHTITLFTNLQGEALKDAFVNSITVQPIPIGLSTEQMWGQDEERRYRVVHTRRMPSPSGQGGTLPVAVALTGFQMRAPQSFLGTGPGTNAVPAPYFYNTVPGKLKVYNEKGDYIEWLVYKDGSSGLKWKGKVLTHSFADVASVPTLTAYMGTAKQNVIVAAGSSGANQPLENIYDYNAGLQEQTGNPSTDLSWKGGIYLVFTLAWPSTAPTGYWTIELEGSDWFGNSESAVGCF
Tail fiber protein F 1086 Shigella Virus Moo19 MGMNSHIPFDADNDWTLDPYHCNRSNDPLVDKVIGNAYAVVRAVYCNLGNLKLLYDFLNTYGMVLGVKSEAELKKLNKLAKYARVYGFADTGDRQVTDYLYVPDDTSGIRPDDQTATGSWIKVSTSGSGSGGTGGGSGSYIPYVYANGSALGGETSFKVPAEALGVPFIIINGSVQYIGYGFSFNPANSTVTLSNPLVQGDEVIALTSAAPASPDNPNVSNWVQVNWLYNNGAAVGGEQVITVPYNFKDVPAVYKNGERYYKNLQTKSYVYDPSTRTVTMTELLAQGDRVIITLGGESASLEITDRTTQEVARANNVKDTDVVLSSSTNVVITDKKVLYDVNAQKYWDLPNLPPNVYIVKVEGNKLIYNPGAVVIDLLEPANPLVIVEPVLSRLGAETGNPMAGTFEKGATVDSAAKSVGSTMEGKLYRWEGALPKTVRAGDTPSSSGGIGSGKWVEITNATLRSQLASTGGAAMVKASDGRTVEQWLVQSDSASFRAKNMAKLAWCDYQVHNRGSLKCCFLGDSMTAGFDRTSSDTIPAQDGDWATRASMNYPYRFASYLPEQSGCSVYITMRAISGYTAKQAYEEALWQSNPNCDIVFIMYAINDSGGVAGATLDLYMEYMEKLIRRYIDWGCAVVVQRPSGGGQGAGNPAWLHWAKRMQMVARVYGCPVFDAHEVMLNRHYAAVQSDGTHYNSMGYAIHGEKLASMLMAGGLLDTYKPVVNETTVWTGMMSDHIGWCDARGNIGTGRSDGAYTRDKVTGVLQAGKATICTFSFYLDAEAAHIYGKLDGLINTIYTNGYWWNNGNKPYYQYAVDIDNSFGASLQRVNKSANNYEGMPGSRKFVGRLIGRGWHTITLFTNLQGEALKDAFVNSITVQPIPIGLSTEQMWGQDEERRYRVVHTRRMPSPSGQGGTLPVAVALTGFQMRAPQSFLGTGPGTNAVPAPYFYNTVPGKLKVYNEKGDYIEWLVYKDGSSGLKWKGKVLTHSFADVASVPTLTAYMGTAKQNVIVAAGSSGANQPLENIYDYNAGLQEQTGNPSTDLSWKGGIYLVFTLAWPSTAPTGYWTIELEGSDWFGNSESAVGCF
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2024-08-18
Deposition Author(s): Bergland Drarvik, S.M. , Parent, K.N. , Subramanian, S.